Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05341 and BPUM_3143

See DNA alignment / Visit BSNT_05341 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:56
# Commandline: needle
#    -asequence pep-align/BSNT_05341___yvlC.1.24716.seq
#    -bsequence pep-align/BPUM_3143___pspC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05341___yvlC-BPUM_3143___pspC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05341___yvlC-BPUM_3143___pspC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05341___yvlC
# 2: BPUM_3143___pspC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 65
# Identity:      38/65 (58.5%)
# Similarity:    49/65 (75.4%)
# Gaps:           1/65 ( 1.5%)
# Score: 206.0
# 
#
#=======================================

BSNT_05341___      1 MNKLYRSEKNKKIAGVIGGLAEYFNWDASLLRVITVILAIMTSVLPVLLI     50
                     |.|||||..:||||||:||||||.:.||||||::|||:..||:.:|:.|:
BPUM_3143___p      1 MKKLYRSATDKKIAGVVGGLAEYLSVDASLLRILTVIVGFMTAFMPIFLV     50

BSNT_05341___     51 YIIWIFIVPSERDMK     65
                     |.||.|:||.|... 
BPUM_3143___p     51 YFIWYFVVPEEGTN-     64


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