Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05341 and BPUM_3143
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:56
# Commandline: needle
# -asequence dna-align/BSNT_05341___yvlC.1.24716.seq
# -bsequence dna-align/BPUM_3143___pspC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05341___yvlC-BPUM_3143___pspC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05341___yvlC-BPUM_3143___pspC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05341___yvlC
# 2: BPUM_3143___pspC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 201
# Identity: 134/201 (66.7%)
# Similarity: 134/201 (66.7%)
# Gaps: 9/201 ( 4.5%)
# Score: 378.0
#
#
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BSNT_05341___ 1 ATGAATAAGCTTTATCGCTCAGAAAAAAATAAGAAAATCGCCGGTGTTAT 50
|||||.|||||||||||.||||.||.|.||||.|||||.||.||||||.|
BPUM_3143___p 1 ATGAAGAAGCTTTATCGTTCAGCAACAGATAAAAAAATAGCGGGTGTTGT 50
BSNT_05341___ 51 CGGAGGTCTCGCGGAATATTTCAATTG-GGACGCATCACTCCTCAGAGTC 99
.||.||.||.||.|||||.|| ||.|| .||.|||||..|.||..|..|.
BPUM_3143___p 51 TGGTGGACTTGCCGAATACTT-AAGTGTCGATGCATCTTTGCTTCGCATT 99
BSNT_05341___ 100 ATAACTGTCATCTTAGCCATTATGACAAGTGTCT-TGCCGGTTTTGCTCA 148
.||||.||.|||.|.|...||||||| ||..|.| ||||..||||..|..
BPUM_3143___p 100 TTAACGGTTATCGTCGGATTTATGAC-AGCATTTATGCCAATTTTCTTGG 148
BSNT_05341___ 149 TTTATATCATTTGGATTTTTATCGTCCCGTCAGAAAGGGA-TATGAAATG 197
|.||..||||.|||..||||.|.||.|||..|| ||||.| ||...||
BPUM_3143___p 149 TCTACTTCATCTGGTATTTTGTTGTTCCGGAAG-AAGGCACTAACTAA-- 195
BSNT_05341___ 198 A 198
BPUM_3143___p 195 - 195
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