Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05339 and BPUM_3142

See DNA alignment / Visit BSNT_05339 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:56
# Commandline: needle
#    -asequence pep-align/BSNT_05339___yvlD.1.24716.seq
#    -bsequence pep-align/BPUM_3142.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05339___yvlD-BPUM_3142.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05339___yvlD-BPUM_3142.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05339___yvlD
# 2: BPUM_3142
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 128
# Identity:      92/128 (71.9%)
# Similarity:   106/128 (82.8%)
# Gaps:           9/128 ( 7.0%)
# Score: 458.5
# 
#
#=======================================

BSNT_05339___      1 MVKWAVSILVNALLLIVIDGYID--------SIHISSIGAAIIASLILSI     42
                     |.:|.|||||||||||||.||.|        |::|...||||:||:|||:
BPUM_3142          1 MFRWIVSILVNALLLIVIAGYFDSGILPGLGSVYIEGFGAAIVASIILSL     50

BSNT_05339___     43 LNVLIKPLLIIFTLPVTMVTLGLFLFVINAITLMMTASIMGDSFQIDGFG     92
                     ||:|:||.|||.|||||::|||||||||||||||||:|.|||||.|||||
BPUM_3142         51 LNILVKPFLIILTLPVTVLTLGLFLFVINAITLMMTSSFMGDSFNIDGFG    100

BSNT_05339___     93 TAIWASVILSVFHLLIQKGILEPLRKK-    119
                     ||||.:||||:|||||||||:|||.|| 
BPUM_3142        101 TAIWMAVILSIFHLLIQKGIVEPLAKKS    128


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