Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05330 and BPUM_3139

See DNA alignment / Visit BSNT_05330 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:55
# Commandline: needle
#    -asequence pep-align/BSNT_05330___nagB.1.24716.seq
#    -bsequence pep-align/BPUM_3139___nagB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05330___nagB-BPUM_3139___nagB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05330___nagB-BPUM_3139___nagB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05330___nagB
# 2: BPUM_3139___nagB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 242
# Identity:     151/242 (62.4%)
# Similarity:   183/242 (75.6%)
# Gaps:           1/242 ( 0.4%)
# Score: 767.0
# 
#
#=======================================

BSNT_05330___      1 MKVMECQTYEELSQKAARITADTIKEKPDAVLGLATGGTPEGTYRELIRL     50
                     |.::|.:..|:|.::||.:.|.||..||||||||||||||..||:|||.|
BPUM_3139___n      1 MNIIEFEDKEQLGKEAAALIARTIASKPDAVLGLATGGTPLDTYQELIHL     50

BSNT_05330___     51 HQTENLSFQNITTVNLDEYAGLSSNAPNSYHFYMNDRLFQHIDSKPSRHF    100
                     :|::.|||:...||||||||||..:..|||..||...||.|||....::|
BPUM_3139___n     51 YQSQQLSFKQTKTVNLDEYAGLDPDHENSYMTYMKRHLFDHIDLPQDQYF    100

BSNT_05330___    101 IPNGNADDLEAECRRYEQLVESLGGTDIQLLGIGRNGHIGFNEPGTSFKS    150
                     :|||.:.|||.||.||:||::.:||.|:||||||:|||||||||||.|.|
BPUM_3139___n    101 LPNGASPDLEKECLRYDQLIQDIGGIDLQLLGIGQNGHIGFNEPGTPFNS    150

BSNT_05330___    151 RTHVVTLNEQTRQANARYFPSIDSVPKKALTMGIQTILSSKRILLLISGK    200
                     .||||.|:|.|||||||||.|||.||..|:||||.:|||||:||||.|||
BPUM_3139___n    151 MTHVVQLDENTRQANARYFSSIDEVPTHAITMGIASILSSKKILLLASGK    200

BSNT_05330___    201 SKAEAVRKLLEGNISEDFPASALHLHSDVTVLIDREAASLRP    242
                     |||:.::.|.:..|..|||||||.||.|||:||||||.||| 
BPUM_3139___n    201 SKAKVIQYLEQTEIHPDFPASALKLHEDVTILIDREAGSLR-    241


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