Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05326 and BPUM_3136

See DNA alignment / Visit BSNT_05326 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:55
# Commandline: needle
#    -asequence pep-align/BSNT_05326___lgt.1.24716.seq
#    -bsequence pep-align/BPUM_3136___lgt.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05326___lgt-BPUM_3136___lgt.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05326___lgt-BPUM_3136___lgt.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05326___lgt
# 2: BPUM_3136___lgt
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 274
# Identity:     210/274 (76.6%)
# Similarity:   244/274 (89.1%)
# Gaps:           5/274 ( 1.8%)
# Score: 1166.0
# 
#
#=======================================

BSNT_05326___      1 MNEAIEPLNPIAFQLGPLAVHWYGIIIGLGALLGLWIAMRESEKRGLQKD     50
                     |||||:|::|||||||||:|||||:|||:|||||||:|:||.||||:.||
BPUM_3136___l      1 MNEAIQPIDPIAFQLGPLSVHWYGVIIGVGALLGLWLALRECEKRGINKD     50

BSNT_05326___     51 TFIDLVLFAIPIAIICARIYYVAFEWDYYAAHPGEIIKIWKGGIAIHGGL    100
                     |||||:||||||||||||||||:||||||..||.||||||.|||||||||
BPUM_3136___l     51 TFIDLILFAIPIAIICARIYYVSFEWDYYQQHPNEIIKIWHGGIAIHGGL    100

BSNT_05326___    101 IGAILTGYVFSRVKNLSFWKLADIAAPSILLGQAIGRWGNFMNQEAHGEA    150
                     |||:||..||::||.:||||:||:|||||||.|||||||||:||||||||
BPUM_3136___l    101 IGAVLTAIVFTKVKRVSFWKIADVAAPSILLAQAIGRWGNFINQEAHGEA    150

BSNT_05326___    151 VSRAFLENLHLPEFIINQMYINGQYYHPTFLYESLWSFVGVIVLLLLRRA    200
                     |||||||||||||||||||||:|.||||||||||||:..||::|:||||.
BPUM_3136___l    151 VSRAFLENLHLPEFIINQMYIDGTYYHPTFLYESLWNLAGVVILILLRRT    200

BSNT_05326___    201 NLRRGEMFLIYIIWYSIGRYFIEGMRTDSLMLTDSLRIAQVISIVLIVLA    250
                     ::||||:||.|:|||||||:|||||||||||||:.|||||:|||.:..:|
BPUM_3136___l    201 SMRRGEIFLSYLIWYSIGRFFIEGMRTDSLMLTEHLRIAQMISIAIFAVA    250

BSNT_05326___    251 VAAIIFRRVKGYSKERYAE-----    269
                     |..|||||:|||:...|.|     
BPUM_3136___l    251 VLLIIFRRIKGYASIPYKENNSSN    274


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