Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05325 and BPUM_3135

See DNA alignment / Visit BSNT_05325 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:55
# Commandline: needle
#    -asequence pep-align/BSNT_05325___yvoD.1.24716.seq
#    -bsequence pep-align/BPUM_3135.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05325___yvoD-BPUM_3135.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05325___yvoD-BPUM_3135.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05325___yvoD
# 2: BPUM_3135
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 314
# Identity:     233/314 (74.2%)
# Similarity:   270/314 (86.0%)
# Gaps:           2/314 ( 0.6%)
# Score: 1189.5
# 
#
#=======================================

BSNT_05325___      1 MKKIFLAGLAAGLQTTWTLGKVIFPVTLLVTLLQHTPVMDWLVRLITPVM     50
                     |.:.:..||.|||.|||||||||||||:||::|||||||||:::.|.|:|
BPUM_3135          1 MGETWKNGLKAGLSTTWTLGKVIFPVTILVSILQHTPVMDWMIQFIRPLM     50

BSNT_05325___     51 SLFGLSGEAAIPLVLGNMLNLYAGIAGILTLDLSVKEVFILAVMLSFCHN    100
                     .||||||||||||||||:||||||||.||||||.||||||||||||||||
BPUM_3135         51 GLFGLSGEAAIPLVLGNVLNLYAGIAAILTLDLPVKEVFILAVMLSFCHN    100

BSNT_05325___    101 LIIESTVAAKVGIRIGVILAVRIGLAAVSAIVINLIWHGGKETAQYGFIA    150
                     |:||||||||||:|:.|||.|||.||.||||||:|:|.||:|.||||.:.
BPUM_3135        101 LMIESTVAAKVGLRVSVILLVRISLAVVSAIVIHLVWQGGQEPAQYGLLT    150

BSNT_05325___    151 AKSAA--PDSWLGMLAEALTKAGLGVLQLAAIVIPLMIIIQFLRDLGWLH    198
                     ....|  |.||..::..||.||.|||||||.|||||||||||:|||||||
BPUM_3135        151 TAQTADVPSSWYMIVLVALQKAVLGVLQLACIVIPLMIIIQFMRDLGWLH    200

BSNT_05325___    199 RFSRWLSPFTQLLGMNKNTSMTMVAGLTISLAYGAGVMIKAVEDDGVSKR    248
                     ..||||||||::|||.:||||||||||||.||||||||:||||:|||||:
BPUM_3135        201 TLSRWLSPFTRMLGMKENTSMTMVAGLTIGLAYGAGVMMKAVEEDGVSKK    250

BSNT_05325___    249 DMTLAFIFLVACHAVVEDTLVFIPLGIPVWPLLLIRVTTAVLLTMAIAHT    298
                     |:||||||||||||||||||:||||||||||||:||:.:|:|||..|::.
BPUM_3135        251 DLTLAFIFLVACHAVVEDTLIFIPLGIPVWPLLVIRLVSAILLTAVISYI    300

BSNT_05325___    299 WKKWKPSAVGKEAI    312
                     |:|.:.:||.||||
BPUM_3135        301 WRKRELAAVRKEAI    314


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