Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05324 and BPUM_3134
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:55
# Commandline: needle
# -asequence pep-align/BSNT_05324___ppaX.1.24716.seq
# -bsequence pep-align/BPUM_3134.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05324___ppaX-BPUM_3134.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05324___ppaX-BPUM_3134.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05324___ppaX
# 2: BPUM_3134
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 216
# Identity: 153/216 (70.8%)
# Similarity: 178/216 (82.4%)
# Gaps: 0/216 ( 0.0%)
# Score: 818.0
#
#
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BSNT_05324___ 1 MSDKQVTTILFDLDGTLINTNELIIASFLHTLEHYYPSKYKREDVLAFIG 50
|::..:.|:|||||||||||||||||||.|||:||||.:|.||::|.|||
BPUM_3134 1 MNESTINTVLFDLDGTLINTNELIIASFQHTLDHYYPGQYSREEILHFIG 50
BSNT_05324___ 51 PSLFETFSSMDPDKCEDMIAMYRAYNHDMHDSLVTEYETVYETLDALKKA 100
||||:|||:||||..:|||.|||.:||:.||.||||||||.:||..|:..
BPUM_3134 51 PSLFDTFSAMDPDLTDDMIQMYRTFNHEQHDLLVTEYETVLDTLKVLQDR 100
BSNT_05324___ 101 GFTLGIVTTKLRDTVNMGLKLTGIGEFFETVVTLDDVTNAKPDPEPVLLA 150
||.|||||||:||||.|||||||:..|||.:||||||.|.||.||||.||
BPUM_3134 101 GFKLGIVTTKIRDTVLMGLKLTGLEPFFEVIVTLDDVQNEKPHPEPVQLA 150
BSNT_05324___ 151 LKQLGSKPEEAIMVGDNYHDVLAGKNAGTKTAGVAWTIKGPEMLAKHEPD 200
|.:|||.|.||:||||||||:|:|:.||||||||||:|||.|.|.||.||
BPUM_3134 151 LSKLGSDPHEAVMVGDNYHDILSGQAAGTKTAGVAWSIKGEEALFKHRPD 200
BSNT_05324___ 201 FMLEKMSDLLQIVGVK 216
|||:||||||.|||..
BPUM_3134 201 FMLKKMSDLLAIVGAD 216
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