Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05313 and BPUM_3127
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:54
# Commandline: needle
# -asequence pep-align/BSNT_05313___hisG.1.24716.seq
# -bsequence pep-align/BPUM_3127___hisG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05313___hisG-BPUM_3127___hisG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05313___hisG-BPUM_3127___hisG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05313___hisG
# 2: BPUM_3127___hisG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity: 189/213 (88.7%)
# Similarity: 195/213 (91.5%)
# Gaps: 6/213 ( 2.8%)
# Score: 964.0
#
#
#=======================================
BSNT_05313___ 1 ------MAMPKGRIFEEAAGLLRQAGYRLPEEFEDSRKLIIDVPEENLRF 44
|||||||||||||||||||||:||||||||||||||||||:|||
BPUM_3127___h 1 MGKVLTMAMPKGRIFEEAAGLLRQAGYQLPEEFEDSRKLIIDVPEESLRF 50
BSNT_05313___ 45 ILAKPMDVTTYVEHGVADVGIAGKDVMLEEERDVYEVLDLKISKCHLAVA 94
||||||||||||||||||||||||||||||.|||||||||.|||||||||
BPUM_3127___h 51 ILAKPMDVTTYVEHGVADVGIAGKDVMLEEARDVYEVLDLNISKCHLAVA 100
BSNT_05313___ 95 GLPNTDWSGVAPRIATKYPNVASSYFREQGEQVEIIKLNGSIELAPLIGL 144
|||...|.|||||:||||||||||||||||||||||||||||||||||||
BPUM_3127___h 101 GLPGASWGGVAPRVATKYPNVASSYFREQGEQVEIIKLNGSIELAPLIGL 150
BSNT_05313___ 145 ADRIVDIVSTGQTLKENGLVETEHICDITSRFIVNPVSYRMKDDVIDEMA 194
|||||||||||||||||||||||||||||||||||||||||||.||||||
BPUM_3127___h 151 ADRIVDIVSTGQTLKENGLVETEHICDITSRFIVNPVSYRMKDAVIDEMA 200
BSNT_05313___ 195 SRLSLVVEGETAK 207
.||:.::|||...
BPUM_3127___h 201 QRLARIIEGEETS 213
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