Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05311 and BPUM_3126
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:54
# Commandline: needle
# -asequence pep-align/BSNT_05311___hisD.1.24716.seq
# -bsequence pep-align/BPUM_3126___hisD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05311___hisD-BPUM_3126___hisD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05311___hisD-BPUM_3126___hisD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05311___hisD
# 2: BPUM_3126___hisD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 429
# Identity: 313/429 (73.0%)
# Similarity: 358/429 (83.4%)
# Gaps: 2/429 ( 0.5%)
# Score: 1582.5
#
#
#=======================================
BSNT_05311___ 1 MKIKTI--SGAERLSLKRSIDAGTEEQRKTVRSIIEDVKANGDQAVRSYT 48
|.|..| ...:.|||||::|.||||||..|:.||::|:.||||||:|:|
BPUM_3126___h 1 MNITYIKEGDTDTLSLKRTLDTGTEEQRLAVQRIIQEVRINGDQAVQSFT 50
BSNT_05311___ 49 AKFDGIEIDSPLVTKEEFEEAYTSLDSRLLQVIRQAIENIREYHERQLQS 98
.:|||:.::.||||:||..:|:..||..::|||:.||.|||.||||||.|
BPUM_3126___h 51 KQFDGVLLEDPLVTEEEMTKAFERLDPAVIQVIQTAIRNIRTYHERQLTS 100
BSNT_05311___ 99 SWFYHRKDGTMLGQKVTALDSAGVYVPGGTAAYPSSVLMNVIPALVAGVE 148
|||||::||:|||||||.||:.|||||||||||||||||||||||||||:
BPUM_3126___h 101 SWFYHQQDGSMLGQKVTPLDAVGVYVPGGTAAYPSSVLMNVIPALVAGVQ 150
BSNT_05311___ 149 RIVLVTPPGKDGLLSPGVLVAAAELGIKDIYKMGGAQAIAALAYGTETIE 198
||||||||||||.||..|||||.||||.::||||||||||.||||||||:
BPUM_3126___h 151 RIVLVTPPGKDGCLSDAVLVAAKELGISEMYKMGGAQAIATLAYGTETIQ 200
BSNT_05311___ 199 PVDKITGPGNIYVALAKREVFGDVDIDMIAGPSEIVVLADETAIPSEIAA 248
||||||||||||||||||||||.||||||||||||.||||:|||..|:||
BPUM_3126___h 201 PVDKITGPGNIYVALAKREVFGQVDIDMIAGPSEIAVLADDTAIAHEVAA 250
BSNT_05311___ 249 DLLSQAEHDKLSSCVFVTDSMALAEAVSAEVSKQLKTLPRREIAEASVRD 298
|||||||||.|||.:.||.|..|||.|.|||..||.||||:.||..|::.
BPUM_3126___h 251 DLLSQAEHDALSSSILVTPSQTLAENVQAEVQAQLDTLPRKSIAAQSIKH 300
BSNT_05311___ 299 YGCIYVAETMVEAINTVNTLAPEHLEIITQSPEALLGSIKHAGAIFLGRY 348
:|.|||.::|..|::.||.|||||||::|..||:.||.||||||||||||
BPUM_3126___h 301 HGRIYVTDSMDRAVDVVNQLAPEHLEVLTAYPESFLGQIKHAGAIFLGRY 350
BSNT_05311___ 349 SPEPVGDYFAGPNHVLPTNGTARFSSPLNVTDFQKKSSIISYSQSAFEEH 398
||||||||||||||||||||||||||||.|||||||:|||||||.|||.|
BPUM_3126___h 351 SPEPVGDYFAGPNHVLPTNGTARFSSPLGVTDFQKKTSIISYSQEAFETH 400
BSNT_05311___ 399 AESIAAFARLEGLEAHARSIEARERRISK 427
.:|||||||||||||||||||:|:|..|.
BPUM_3126___h 401 RDSIAAFARLEGLEAHARSIESRKREESS 429
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