Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05308 and BPUM_3124
See
DNA alignment /
Visit
BSNT_05308 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:54
# Commandline: needle
# -asequence pep-align/BSNT_05308___hisH.1.24716.seq
# -bsequence pep-align/BPUM_3124___hisH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05308___hisH-BPUM_3124___hisH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05308___hisH-BPUM_3124___hisH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05308___hisH
# 2: BPUM_3124___hisH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity: 140/212 (66.0%)
# Similarity: 163/212 (76.9%)
# Gaps: 0/212 ( 0.0%)
# Score: 723.0
#
#
#=======================================
BSNT_05308___ 1 MIGVIDYGMGNLYSVSKALERVGVPYFVSEKPEELKEADAFILPGVGSFG 50
||||||||||||:||||||||.|..|.||...||||:|||:||||||||.
BPUM_3124___h 1 MIGVIDYGMGNLFSVSKALERAGARYIVSADVEELKKADAYILPGVGSFR 50
BSNT_05308___ 51 DAMDNLRYTKLDQLIHDMVSEGRLLLGICLGMQLLFEESEENGTASGLGL 100
|||..|:.|.|:..|:.:|.||:||.|||||||||||||||.|...||||
BPUM_3124___h 51 DAMQLLKQTGLEGFIYQVVQEGKLLFGICLGMQLLFEESEEAGRTKGLGL 100
BSNT_05308___ 101 LKGKAVRLKAEDEKGNKLKVPHMGWNRLSFHNESPLLTKTEQGYAYFVHS 150
|||:.|.||..|:.|.||||||||||.|:||..|||.....:|:||||||
BPUM_3124___h 101 LKGRVVLLKDHDKDGQKLKVPHMGWNELTFHQPSPLFDGVPEGFAYFVHS 150
BSNT_05308___ 151 YYIDGMEEDSLLASTDYGVRVPAVVGKRNVFGAQFHPEKSSTVGMSILTQ 200
||:..|..:..|||.||||:|||:|||.||.|||||||||||.||::|.|
BPUM_3124___h 151 YYVRDMNPEEQLASADYGVQVPAIVGKGNVLGAQFHPEKSSTTGMALLKQ 200
BSNT_05308___ 201 FTKMAAKQKVKK 212
|.::|.:|:|.|
BPUM_3124___h 201 FIQLANEQRVNK 212
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.