Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05306 and BPUM_3122

See DNA alignment / Visit BSNT_05306 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:54
# Commandline: needle
#    -asequence pep-align/BSNT_05306___hisF.1.24716.seq
#    -bsequence pep-align/BPUM_3122___hisF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05306___hisF-BPUM_3122___hisF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05306___hisF-BPUM_3122___hisF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05306___hisF
# 2: BPUM_3122___hisF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 252
# Identity:     215/252 (85.3%)
# Similarity:   233/252 (92.5%)
# Gaps:           0/252 ( 0.0%)
# Score: 1097.0
# 
#
#=======================================

BSNT_05306___      1 MITKRIIPCLDVKEGRVVKGIQFLELKDAGDPVELAEVYDREGADELVFL     50
                     |:||||||||||||||||||:|||.|||||||||||::||.|||||||||
BPUM_3122___h      1 MMTKRIIPCLDVKEGRVVKGVQFLGLKDAGDPVELAQIYDEEGADELVFL     50

BSNT_05306___     51 DISASHEGRKTMIDVVEQVAAKLAIPFTVGGGINQLSDMKTILRAGADKV    100
                     ||||||||||||:|||:|||:.||||||||||||.|.|||.|||||||||
BPUM_3122___h     51 DISASHEGRKTMVDVVKQVASTLAIPFTVGGGINHLDDMKRILRAGADKV    100

BSNT_05306___    101 SVNTAAVLRPELITEGAEFFGSQCIVLAIDAKYDKESDTYKVYTHGGRKK    150
                     |||||||||||||:|||:||||||||:||||||.:|...|.|||||||::
BPUM_3122___h    101 SVNTAAVLRPELISEGADFFGSQCIVVAIDAKYVEEKKAYMVYTHGGRRQ    150

BSNT_05306___    151 TDWEVTAWAKEGVKRGAGEILLTSMDSDGEKKGFDHTLTKLVSETVPVPV    200
                     ||.||:.||||.|.||||||||||||:|||||||||.|||||||.|.|||
BPUM_3122___h    151 TDIEVSDWAKEAVLRGAGEILLTSMDADGEKKGFDHRLTKLVSEAVTVPV    200

BSNT_05306___    201 IASGGAGNAQHMLEAFTKGEADAALAASIFHYKETSIKEVKSYLKEYGVN    250
                     |||||||||||||||||||||||||||||||||||||:|||:||||:||.
BPUM_3122___h    201 IASGGAGNAQHMLEAFTKGEADAALAASIFHYKETSIQEVKTYLKEHGVK    250

BSNT_05306___    251 VR    252
                     ||
BPUM_3122___h    251 VR    252


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