Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05299 and BPUM_3120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:53
# Commandline: needle
# -asequence pep-align/BSNT_05299___yvcD.1.24716.seq
# -bsequence pep-align/BPUM_3120.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05299___yvcD-BPUM_3120.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05299___yvcD-BPUM_3120.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05299___yvcD
# 2: BPUM_3120
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 488
# Identity: 269/488 (55.1%)
# Similarity: 352/488 (72.1%)
# Gaps: 7/488 ( 1.4%)
# Score: 1391.0
#
#
#=======================================
BSNT_05299___ 1 MGKHTSEHKNHAQIVQLLQDGQYFFHKGLKAYKERNLKRASKLIQRAVHL 50
|.|:||:: ||.|:|||.|||.||||||||||:||||.|||||||||:.|
BPUM_3120 1 MSKYTSQN-NHTQVVQLFQDGHYFFHKGLKAYRERNLSRASKLIQRAIVL 49
BSNT_05299___ 51 EPEDSEMLSQLAVIYSEMGQYQESNDLLDYIMANLEAEMPECHYFKANNF 100
|||:.|||||||:||:|||.||:||:|||:|:.:::..|.|||||||||:
BPUM_3120 50 EPENVEMLSQLAIIYTEMGHYQQSNELLDFILEHIDENMSECHYFKANNY 99
BSNT_05299___ 101 AHLGLFQEAYKEAAAYSDADPDGEFAEENDSLLDLLDLGDDGIEDSLYDQ 150
|:|||||||||.|.||:..:.:||||:|||.||||||:.|:..||..|||
BPUM_3120 100 ANLGLFQEAYKSATAYASLEENGEFADENDDLLDLLDMSDEEDEDFPYDQ 149
BSNT_05299___ 151 DELLVKQDRAKSLLESGQLAEAVAALEEITAEYPELWSAYNNLALAYFYS 200
|:|:||||:|..|||||:|.||:..||::..||||.||||||||||||||
BPUM_3120 150 DDLIVKQDQANHLLESGRLDEAIEMLEQMIVEYPEFWSAYNNLALAYFYS 199
BSNT_05299___ 201 GNVVKAKQTAYEVLSHNEGNLHALCNLLVFYYYEREDEKVAELSDQLSNV 250
|.:.:||:....||..|.||||||||.||||:||:|:|||..|:.||::|
BPUM_3120 200 GQIHQAKEMLNRVLHENPGNLHALCNQLVFYHYEKEEEKVNTLAKQLTHV 249
BSNT_05299___ 251 YPMLLEQRYKLGATLALVGRYEIGYKWLKSLYKIGFEGDDTFFYWLSCSA 300
||:|.|||||||||.||||.:|..:|||.||||.||:||.||.|||:.:|
BPUM_3120 250 YPILSEQRYKLGATFALVGEFEWAFKWLYSLYKTGFQGDSTFLYWLASAA 299
BSNT_05299___ 301 YFTGHTDFAETIWRKVESQYPGEDRPAPWIERREALPS--SVEQRLAAYY 348
|:|||...|:|:|.|:..:....|...||.::.|.... |:|:||.|||
BPUM_3120 300 YYTGHKTLAQTVWDKMVEEDIDADEIKPWQDKPEETEPMVSIEERLTAYY 349
BSNT_05299___ 349 ISSTKGETEHLEAVIRSKRITAPFENHFVKLLL-NGDSGAADVSEDALFA 397
:|..|||.:.|::|:.::.....||..|::||| .|:......||||:||
BPUM_3120 350 VSKQKGERDVLQSVLDARAAKTAFEQQFIELLLYEGEMEERSFSEDAVFA 399
BSNT_05299___ 398 YQTVKLLEQAEKEEMKTEVMSCWVFHVIQQIRAV-APLKNEKGWAAAICY 446
.|....||:|.:.: :.:...|:||:|||.||. ...||...||||..|
BPUM_3120 400 KQAASSLEEAVQPD--SHMPYFWLFHIIQQARASGVDKKNAPAWAAASYY 447
BSNT_05299___ 447 IWKEAHGKQDTKKDTAARFGISPATLTKYMKYIDDILE 484
:|.:...:..:||:.|:.|.||..||:||.:.|..::|
BPUM_3120 448 VWMQEQEESISKKEIASSFQISVQTLSKYEQVICSLIE 485
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