Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05297 and BPUM_3119
See
DNA alignment /
Visit
BSNT_05297 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:53
# Commandline: needle
# -asequence pep-align/BSNT_05297___yvcE.1.24716.seq
# -bsequence pep-align/BPUM_3119.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05297___yvcE-BPUM_3119.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05297___yvcE-BPUM_3119.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05297___yvcE
# 2: BPUM_3119
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 474
# Identity: 284/474 (59.9%)
# Similarity: 368/474 (77.6%)
# Gaps: 16/474 ( 3.4%)
# Score: 1396.0
#
#
#=======================================
BSNT_05297___ 1 MRKSLITLGLASVIGTSSFLIPFTSKTASAETLDEKKQKIESKQSEVASS 50
.|..||.|||||||.|...||||.: |:|:..::|||:::||||||..:
BPUM_3119 1 -MKKFITFGLASVIGASGLFIPFTHE-ANAQNFEQKKQELDSKQSEVNKN 48
BSNT_05297___ 51 IEAKEKELTELQENQSKIEKELKDINAKALDTSNKIEDKKEENDKTKEEI 100
::.|:.||::|:..|..:..:||:|:.|||.||::||:|::||::||:||
BPUM_3119 49 LQKKKDELSKLEAKQEALALKLKEIDEKALKTSDQIEEKQKENEQTKKEI 98
BSNT_05297___ 101 KKLKKEIKETEARIEKRNEILKKRVRSLQESGGSQGYIDVLLGSTSFGDF 150
..|||:|.:||.|||.||:.||||||:|||||||..|||||||:.||.||
BPUM_3119 99 NALKKDIADTEKRIEDRNKFLKKRVRALQESGGSTKYIDVLLGAKSFSDF 148
BSNT_05297___ 151 ISRATAVSSIVDADKDLIKQQEQDKAKLEDSEADLNDKLKEVQAALAKLE 200
||||.|||::::||.::||:||:|||:|:.||.:||.||::||..|||||
BPUM_3119 149 ISRAGAVSTLINADSEIIKEQEKDKAELQKSENELNTKLEDVQKTLAKLE 198
BSNT_05297___ 201 TMQKDLDKQLNEKDKLFDEAKASQKKTAKAISELKSEASELANQKANTEA 250
|:|.||:|||:||||||.:.|..:...:..||||.|||:.:|::|..|.|
BPUM_3119 199 TLQTDLNKQLDEKDKLFKQVKKQKGSASSQISELNSEANSIASEKDATIA 248
BSNT_05297___ 251 EQARIKKEQEAAAALIKKQEEAQKASDE-TQTDDSQTATTESAKASSSDD 299
.|.:.:|| .:|.||||.:| .|....:.|:.::...||::|
BPUM_3119 249 AQKQAEKE---------AREAAQKAKEEKVQRQQQRQASVQAEDNSSTND 289
BSNT_05297___ 300 ---SSDNSSNGSSNSSSNGSSSKKSSGSNSNSGGT-VISNSGGIEGAISV 345
||:||::||||:::|.|:|...|...|..||: |.||.||||||||.
BPUM_3119 290 SSPSSNNSNSGSSNNNNNNSNSSSPSKKPSTGGGSPVSSNVGGIEGAIST 339
BSNT_05297___ 346 GSSIVGQSPYKFGGGRSQSDINNRIFDCSSFVRWAYASAGVNLGPVGGTT 395
||:||||||||:.|||||:||:.|.||||||||||:||||:|||||||||
BPUM_3119 340 GSTIVGQSPYKWAGGRSQADIDARRFDCSSFVRWAFASAGINLGPVGGTT 389
BSNT_05297___ 396 TDTLVGRGQAVSASEMKRGDLVFFDTYKTNGHVGIYLGNGTFLNDNTSHG 445
||||||:|:|||||:|||||||||||||.|||||||||||||||||:|.|
BPUM_3119 390 TDTLVGKGRAVSASDMKRGDLVFFDTYKVNGHVGIYLGNGTFLNDNSSRG 439
BSNT_05297___ 446 VSVDSMSNPYWKKAFKGVVRRVVQ 469
||||||||.||||||.|||||||:
BPUM_3119 440 VSVDSMSNVYWKKAFNGVVRRVVE 463
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.