Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05296 and BPUM_3117

See DNA alignment / Visit BSNT_05296 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:53
# Commandline: needle
#    -asequence pep-align/BSNT_05296___trxB.1.24716.seq
#    -bsequence pep-align/BPUM_3117___trxB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05296___trxB-BPUM_3117___trxB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05296___trxB-BPUM_3117___trxB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05296___trxB
# 2: BPUM_3117___trxB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 316
# Identity:     283/316 (89.6%)
# Similarity:   301/316 (95.3%)
# Gaps:           7/316 ( 2.2%)
# Score: 1488.0
# 
#
#=======================================

BSNT_05296___      1 MSEEKIYDVIIIGAGPAGMTAAVYTSRANLSTLMIERGIPGGQMANTEDV     50
                     ||||||||.||||||||||||||||||.||||||||||||||||||||||
BPUM_3117___t      1 MSEEKIYDTIIIGAGPAGMTAAVYTSRGNLSTLMIERGIPGGQMANTEDV     50

BSNT_05296___     51 ENYPGFESILGPELSNKMFEHAKKFGAEYAYGDIKEVIDGKEYKVVKAGS    100
                     |||||||||||||||||||:||||||||||||||||::||:|||:|||||
BPUM_3117___t     51 ENYPGFESILGPELSNKMFDHAKKFGAEYAYGDIKEIVDGEEYKIVKAGS    100

BSNT_05296___    101 KEYKARAVIIAAGAEYKKIGVPGEKELGGRGVSYCAVCDGAFFKGKELVV    150
                     ||||.|:|||:|||||||||.|||||||||||||||||||||||.|||||
BPUM_3117___t    101 KEYKGRSVIISAGAEYKKIGAPGEKELGGRGVSYCAVCDGAFFKNKELVV    150

BSNT_05296___    151 VGGGDSAVEEGVYLTRFASKVTIVHRRDKLRAQSILQARAFDNEKVDFLW    200
                     :||||||||||||||||||||||||||||||||||||||||||||:||:|
BPUM_3117___t    151 IGGGDSAVEEGVYLTRFASKVTIVHRRDKLRAQSILQARAFDNEKIDFMW    200

BSNT_05296___    201 NKTVKEIHEENGKVGNVTLVDTVTGEESEFKTDGVFIYIGMLPLSKPFEN    250
                     |||||:|:|||||||:|||:||||||:.:|||||||||||||||||||||
BPUM_3117___t    201 NKTVKQINEENGKVGSVTLIDTVTGEKEDFKTDGVFIYIGMLPLSKPFEN    250

BSNT_05296___    251 LGITNEEGYIETNERMETKVEGIFAAGDIREKSLRQIVTATGDGSIAAQS    300
                     ||||||||||||||||||:|||||||||||||:|||||||||||||||||
BPUM_3117___t    251 LGITNEEGYIETNERMETRVEGIFAAGDIREKTLRQIVTATGDGSIAAQS    300

BSNT_05296___    301 VQHYVEELQ-------    309
                     .|||||||.       
BPUM_3117___t    301 AQHYVEELAEKLKAAK    316


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