Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05294 and BPUM_3116

See DNA alignment / Visit BSNT_05294 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:53
# Commandline: needle
#    -asequence pep-align/BSNT_05294___yvcI.1.24716.seq
#    -bsequence pep-align/BPUM_3116.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05294___yvcI-BPUM_3116.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05294___yvcI-BPUM_3116.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05294___yvcI
# 2: BPUM_3116
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity:     124/158 (78.5%)
# Similarity:   143/158 (90.5%)
# Gaps:           4/158 ( 2.5%)
# Score: 698.0
# 
#
#=======================================

BSNT_05294___      1 MTYLQRVTNCVLQTDDKVLLLQKPRRGWWVAPGGKMESGESVRDSVIREY     50
                        :||||||||..:|:|||||||||||||||||||||||||:|||:|||
BPUM_3116          1 ---MQRVTNCVLHHEDQVLLLQKPRRGWWVAPGGKMESGESVKDSVVREY     47

BSNT_05294___     51 REETGIYIINPQLKGVFTFIIKDGDHIVSEWMMFTFVADSYTGQNVSESE    100
                     ||||||||:|||||||||||||:||.||.|||||||:|||:||:||:|||
BPUM_3116         48 REETGIYILNPQLKGVFTFIIKEGDQIVQEWMMFTFMADSFTGKNVTESE     97

BSNT_05294___    101 EGKLQWHDVNDIQNLPMAPGDGHILDFMMKGQGLLHGTFTYTPDFELLSY    150
                     ||.|:||:..|:.:|||||||.||||||:||:|||||||||||||||::|
BPUM_3116         98 EGILKWHEAKDVPHLPMAPGDSHILDFMLKGKGLLHGTFTYTPDFELIAY    147

BSNT_05294___    151 RLDPQHIK    158
                     |||||.. 
BPUM_3116        148 RLDPQGD-    154


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