Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05281 and BPUM_3106
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:52
# Commandline: needle
# -asequence pep-align/BSNT_05281___yvdA.1.24716.seq
# -bsequence pep-align/BPUM_3106.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05281___yvdA-BPUM_3106.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05281___yvdA-BPUM_3106.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05281___yvdA
# 2: BPUM_3106
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 219
# Identity: 130/219 (59.4%)
# Similarity: 156/219 (71.2%)
# Gaps: 27/219 (12.3%)
# Score: 685.0
#
#
#=======================================
BSNT_05281___ 1 ------------------------MVS-LTSILEHNQRFVSEKKYEPYKT 25
|.| |..||:||..||.|:.|||||.
BPUM_3106 1 MRTHERKGGQAGAYVTYKEMGDGKMGSKLEQILQHNSEFVHERHYEPYKA 50
BSNT_05281___ 26 TKFPSKKLVIVTCMDTRLTELLPQAMGLKNGDAKIVKNAGAIVSHPFGSV 75
.|||.|||||:|||||||.|||||:|||:|||||::|||||||:||||||
BPUM_3106 51 GKFPEKKLVILTCMDTRLLELLPQSMGLRNGDAKVIKNAGAIVTHPFGSV 100
BSNT_05281___ 76 MRSILVAIYELQAEAVCIVGHHECGMSGLNASSILEKAKERGVEDSCLNL 125
|||||:|||||:||.|||||||||||:||.|..:|||||.||:|:.||::
BPUM_3106 101 MRSILLAIYELKAEEVCIVGHHECGMAGLAADPLLEKAKARGIEEKCLSI 150
BSNT_05281___ 126 LTSAGLDLKTWLTGFHSVEESVSHSVNMIKNHPLLPKKVPVHGLVIHPET 175
:.::|:|||.|||||.|||||||.||.::|.|||:|..|.||||||.|.|
BPUM_3106 151 VKNSGVDLKGWLTGFDSVEESVSQSVKLVKEHPLMPNDVAVHGLVIDPAT 200
BSNT_05281___ 176 GKLDVVINGYETELINNHS 194
||||||:...:.:....
BPUM_3106 201 GKLDVVVKDKQIDAQYT-- 217
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