Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05278 and BPUM_3104

See DNA alignment / Visit BSNT_05278 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:52
# Commandline: needle
#    -asequence pep-align/BSNT_05278.1.24716.seq
#    -bsequence pep-align/BPUM_3104___mazG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05278-BPUM_3104___mazG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05278-BPUM_3104___mazG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05278
# 2: BPUM_3104___mazG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 109
# Identity:      43/109 (39.4%)
# Similarity:    57/109 (52.3%)
# Gaps:          40/109 (36.7%)
# Score: 235.0
# 
#
#=======================================

BSNT_05278         1 -------------------------------------MARAVRAYEIGRD     13
                                                          :||||||.|||||
BPUM_3104___m      1 MQTNEMEKWIKDFYKKRNWAEYGPFIRLGFLMEETGELARAVRAIEIGRD     50

BSNT_05278        14 RPDEKESSRAEQKQELIEEMGDVIGNIAILADMYGVSLEDVMKAHQEKLT     63
                     ||||::...||.|:||:||||||:||:.||||:|.|::|::..:||:|||
BPUM_3104___m     51 RPDEQKQKSAELKRELVEEMGDVLGNLLILADLYDVTVEEIFSSHQQKLT    100

BSNT_05278        64 KRFEHA---     69
                     |||...   
BPUM_3104___m    101 KRFSELKST    109


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