Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05276 and BPUM_3103
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:52
# Commandline: needle
# -asequence pep-align/BSNT_05276___yvdD.1.24716.seq
# -bsequence pep-align/BPUM_3103.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05276___yvdD-BPUM_3103.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05276___yvdD-BPUM_3103.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05276___yvdD
# 2: BPUM_3103
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 197
# Identity: 148/197 (75.1%)
# Similarity: 164/197 (83.2%)
# Gaps: 6/197 ( 3.0%)
# Score: 799.0
#
#
#=======================================
BSNT_05276___ 1 -----MKTICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGGSRVGL 45
|||||||||||||..:.||.||.|||.|||||.|.|||||||:||
BPUM_3103 1 MELFLMKTICVFAGSNPGVKDVYKEKAVELGAYMAEQDIRLVYGGSRIGL 50
BSNT_05276___ 46 MGTIADAIMENGGTAIGVMPSGLFSGEVVHQNLTELIEVNGMHERKAKMS 95
||.|||.|:.:||..|||||.|||.||||||.|||||||.||||||||||
BPUM_3103 51 MGAIADEILRHGGQVIGVMPKGLFRGEVVHQELTELIEVTGMHERKAKMS 100
BSNT_05276___ 96 ELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKM 145
|||||||:||||||||||||||||||||||||||||||.||.||.|::.|
BPUM_3103 101 ELADGFIAMPGGFGTYEELFEVLCWAQIGIHQKPIGLYQVNDYFNPLIDM 150
BSNT_05276___ 146 VKYSIQEGFSNESHLKLIHSSSRPDELIEQMQNYSYPILEKKWTEI- 191
||:|:||||||||||:|:|:||.|:|||.||.:|..|.||:||||:
BPUM_3103 151 VKFSVQEGFSNESHLQLLHASSEPEELITQMSSYQTPTLEQKWTELS 197
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