Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05188 and BPUM_3079

See DNA alignment / Visit BSNT_05188 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:51
# Commandline: needle
#    -asequence pep-align/BSNT_05188___yveO.1.24716.seq
#    -bsequence pep-align/BPUM_3079.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05188___yveO-BPUM_3079.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05188___yveO-BPUM_3079.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05188___yveO
# 2: BPUM_3079
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 285
# Identity:     162/285 (56.8%)
# Similarity:   200/285 (70.2%)
# Gaps:          11/285 ( 3.9%)
# Score: 829.0
# 
#
#=======================================

BSNT_05188___      1 --MNSGPKVSVIMGIYNCERTLAESIESILSQSYKNWELILCDDASTDGT     48
                       |.. ||||:|||:|||:.|:.|||||||.|:|.|||.|:|||||||||
BPUM_3079          1 MSMRK-PKVSIIMGVYNCQDTVEESIESILQQTYDNWEFIICDDASTDGT     49

BSNT_05188___     49 LRIAKQYAAHYSDCIKLIQNKTNKRLAASLNHCLSHATGDYIARQDGDDL     98
                     ......|.....:.|:||:|:.|:|||||||.||:.|.||.||||||||:
BPUM_3079         50 YEKVLSYTKRDPERIRLIRNEHNQRLAASLNRCLAEARGDLIARQDGDDI     99

BSNT_05188___     99 SFPRRLEKQVAFLEKHRHYQVVGTGMLVFDEFGVRGTRILPSVPEPGIMA    148
                     |.|.||||||.|||.|..|.||||.|.||||.|.:|.|.|.|.|:..::|
BPUM_3079        100 SVPDRLEKQVHFLETHPEYDVVGTAMTVFDESGTKGVRALISAPDRKVLA    149

BSNT_05188___    149 KGTPFCHGTIMMRASAYRTLKGYLSVRRTRRMEDIDLWLRFFEEGFRGYN    198
                     :|||||||||||||:||:.|.||.||:.||||||||||:|||..|.:|:|
BPUM_3079        150 RGTPFCHGTIMMRAAAYKDLNGYRSVKTTRRMEDIDLWIRFFAAGRKGFN    199

BSNT_05188___    199 LQEALYKVREDSDAFKRRSFTYSIDNAILVYQACRRLKLPLSDYIYIAKP    248
                     |||.||.||||..||:||.|.||||||.||.:||..|||....|::..||
BPUM_3079        200 LQEPLYLVREDEAAFQRRKFQYSIDNAWLVLKACWLLKLSPIHYLFALKP    249

BSNT_05188___    249 LIRAFMPAAVMDRYHKKRVMNQQEGLVKHE-----    278
                     ::||.:...:|..||::::   :..|:|..     
BPUM_3079        250 VVRACLSPKIMKFYHQRKL---EASLLKRRPIRDE    281


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