Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05186 and BPUM_3078
See
DNA alignment /
Visit
BSNT_05186 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:51
# Commandline: needle
# -asequence pep-align/BSNT_05186___yveP.1.24716.seq
# -bsequence pep-align/BPUM_3078.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05186___yveP-BPUM_3078.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05186___yveP-BPUM_3078.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05186___yveP
# 2: BPUM_3078
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 385
# Identity: 212/385 (55.1%)
# Similarity: 265/385 (68.8%)
# Gaps: 10/385 ( 2.6%)
# Score: 1098.0
#
#
#=======================================
BSNT_05186___ 1 MNSSQKRVLHVLSGMNRGGAETMVMNLYRKMDKSKVQFDFLTYRNDPCAY 50
.|..|||||::.||||||||||:||:||.:|::.:||||:|:|.|.|.|
BPUM_3078 1 -MSEPKRVLHIVGGMNRGGAETMIMNIYRALDRNVLQFDFITHRKDVCDY 49
BSNT_05186___ 51 DEEILSLGGRLFYVPSIGQSNPLTFVRNVRNAIKENGPFSAVHAHTDFQT 100
||||..||||:|||||||.|:|..|||.:...||..||:.||||||||||
BPUM_3078 50 DEEIQKLGGRIFYVPSIGASSPFAFVRTLTKTIKRTGPYQAVHAHTDFQT 99
BSNT_05186___ 101 GFIALAARLAGVPVRVCHSHNTSWKTGFNWKDRLQLLVFRRLILANATAL 150
||.||||:||||.||:||||||:||...|..|.:.|..|||||.|.:|.|
BPUM_3078 100 GFSALAAKLAGVKVRICHSHNTAWKQSPNGIDHMMLKGFRRLIFAFSTKL 149
BSNT_05186___ 151 CACGEDAGRFLFGQSNMERERVHLLPNGIDLEL-FAPNGQAADEEKAARG 199
.|||||||.|||||..|:..:|.:|||||||.| |.|:.:...:.|...|
BPUM_3078 150 VACGEDAGAFLFGQKKMKNGQVEVLPNGIDLSLFFQPDPEEKVKIKKQLG 199
BSNT_05186___ 200 IAADRLIIGHVARFHEVKNHAFLLKLAAHLKERGVRFQLVLAGDGPLRGE 249
:....::|||:.||||.|||.|.::||..||.:||.|||||.|||||:..
BPUM_3078 200 LHEKSMVIGHIGRFHEQKNHVFFMELAQTLKRQGVSFQLVLVGDGPLKQV 249
BSNT_05186___ 250 IEEEARQQNLLSDVLFLGTEERIHELMRTFDVFVMPSLYEGLPVVLVEAQ 299
:|..|.:..||.|::|.|....|.|.|:.|||||||||:||||:||||||
BPUM_3078 250 VESYADKAGLLDDIVFTGVVSDIPEYMKAFDVFVMPSLFEGLPLVLVEAQ 299
BSNT_05186___ 300 ASGLPCIISDSITEKVDAGLGLVTRLSLSEPISVWAETIARAAAAGRPKR 349
||||||:|||.|||:||.|.|||.|:||.:....|.:.:..|..|..|.:
BPUM_3078 300 ASGLPCVISDHITEEVDLGCGLVKRMSLRDSAHEWMKAVLEAYHAEPPLQ 349
BSNT_05186___ 350 EFINETLAQLGYDAQQNVGALLNVYNISTEKDHDR 384
|.|...|.|.|:|.:||:..::|.|.:
BPUM_3078 350 ETITSQLEQRGFDVKQNITRVMNGYGL-------- 376
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.