Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05185 and BPUM_3077

See DNA alignment / Visit BSNT_05185 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:50
# Commandline: needle
#    -asequence pep-align/BSNT_05185___yveQ.1.24716.seq
#    -bsequence pep-align/BPUM_3077.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05185___yveQ-BPUM_3077.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05185___yveQ-BPUM_3077.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05185___yveQ
# 2: BPUM_3077
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 367
# Identity:     240/367 (65.4%)
# Similarity:   296/367 (80.7%)
# Gaps:           0/367 ( 0.0%)
# Score: 1320.0
# 
#
#=======================================

BSNT_05185___      1 MIVYAVNMGIVFIWSWFAKMCGGRDDSLATGYRPNKLLIWIPLASLVLVS     50
                     |.||.|||.:|::||.||...|.|||::.:|:||||:|:..|...|.:|:
BPUM_3077          1 MAVYLVNMIMVYLWSSFAAFYGRRDDTIQSGWRPNKILVLFPFLFLCIVA     50

BSNT_05185___     51 GLRYRVGTDFQTYTLLYELAGDYQNVWQIFGFGTAKTATDPGFTAFLWLM    100
                     |:||:|||||.||..:||.:.:|:..|.|||||..|.|||||||..||::
BPUM_3077         51 GIRYKVGTDFVTYGQMYEFSVNYEKPWHIFGFGVDKAATDPGFTFILWML    100

BSNT_05185___    101 NFITEDPQIMYFTVAVVTYSFIMKTLADYGRPFELSVFLFLGTFHYYASF    150
                     |.::.||||||.:|..:||.||:|||..||||||||:.||||||||||||
BPUM_3077        101 NQLSHDPQIMYISVGAITYFFIIKTLIQYGRPFELSMLLFLGTFHYYASF    150

BSNT_05185___    151 NGIRQYMVAAVLFWAVRYIISGNWKRYFLIVLVSSLFHSSALIMIPVYFI    200
                     ||:|||||||:||:|:|.:|:|.||.||.:|||.||||||||||||||||
BPUM_3077        151 NGMRQYMVAAILFYAIRLVINGQWKLYFPLVLVCSLFHSSALIMIPVYFI    200

BSNT_05185___    201 VRRKAWSPAIFGLSALFLGMTFLYQKFISVFVVVLENSSYSHYEKWLMTN    250
                     ||.|:||..:..|..:|||:|.||.:|:|||||:|:.|||.|||:||.||
BPUM_3077        201 VRTKSWSWMMLVLCMIFLGLTALYDRFVSVFVVMLQGSSYGHYEEWLTTN    250

BSNT_05185___    251 TNGMNVIKIAVLVLPLFLAFCYKERLRSLWPQIDIVVNLCLLGFLFGLLA    300
                     ||||||.||.||:|||.|||.|::|||.|.|:.|.|||.||||||||:||
BPUM_3077        251 TNGMNVTKIGVLILPLLLAFFYRKRLRELTPESDYVVNFCLLGFLFGILA    300

BSNT_05185___    301 TKDVIFARFNIYFGLYQMILVPYFVRIFDEKSNALIYIAIVVCYFLYSYL    350
                     |||||:|||:|||||||:||:|||.||||::||..||:.|.|||.|||.:
BPUM_3077        301 TKDVIYARFHIYFGLYQLILLPYFTRIFDQRSNVFIYVGIAVCYILYSIM    350

BSNT_05185___    351 LMPVDSSVLPYRTIFSR    367
                     |||.|||||||||||::
BPUM_3077        351 LMPFDSSVLPYRTIFTK    367


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