Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05183 and BPUM_3076

See DNA alignment / Visit BSNT_05183 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:50
# Commandline: needle
#    -asequence pep-align/BSNT_05183___yveR.1.24716.seq
#    -bsequence pep-align/BPUM_3076.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05183___yveR-BPUM_3076.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05183___yveR-BPUM_3076.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05183___yveR
# 2: BPUM_3076
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity:     157/345 (45.5%)
# Similarity:   223/345 (64.6%)
# Gaps:           6/345 ( 1.7%)
# Score: 796.0
# 
#
#=======================================

BSNT_05183___      1 METSAVSLLVAVYNTETYIRTCLESLRNQTVDNIEIIIVNDGSQDASPDI     50
                       ..|:|||||||||..|:..||:|:.:|:..:||:|:|||||.|.|.:.
BPUM_3076          1 --MPAISLLVAVYNTSQYLEQCLQSIVDQSFSDIEVILVNDGSTDRSGEY     48

BSNT_05183___     51 AEEYAKMDNRFKVIHQENQGLGAVRNKGIEAARGEFIAFIDSDDWIEPDY    100
                     .|.:|..|.||:||||.|||||||||:|||.|:|.:||||||||.:.|.|
BPUM_3076         49 LEAFAAQDQRFRVIHQTNQGLGAVRNRGIEEAKGTYIAFIDSDDVLAPHY     98

BSNT_05183___    101 CEQML-RAAGDETDLVICNYAAEFEDTGKTMDSDIAQTYQDQPKEHYIKA    149
                     ||.:. :|.....||||..|..:||.:.:|:.:.:. ..:...|...|:|
BPUM_3076         99 CEALYEKAKMTGADLVISEYWIQFEQSKRTIPTTLL-AERSAEKTSLIEA    147

BSNT_05183___    150 LFEGKVRGFSWNKLYRRSMIEAHRLSFPLRGELEHVEDQFFSFRAHFFAR    199
                     |..|.:.||||||||||:.||.|.:.||||||||::|||:.:.|....:|
BPUM_3076        148 LLHGDITGFSWNKLYRRAFIEEHDIRFPLRGELENIEDQYVTLRCFSLSR    197

BSNT_05183___    200 SVSYVKTPLYHYRIHLSSIVQRYQKKLFESGLALYEANAAFLQENNKLEE    249
                     .:::|..|||:||:|||||||||||:.|..||..|.|...||.|.:.:..
BPUM_3076        198 GIAFVHEPLYYYRVHLSSIVQRYQKQYFHHGLTFYHAQRLFLTEYDDISL    247

BSNT_05183___    250 YRKELDTFIVLHSSICMLNEWKTSGSRRLFEKLRNVGVICADPVFQESLS    299
                     |.|.||.|||.|:..|||||||:..:..|.|||.::..:.....||:::.
BPUM_3076        248 YEKALDFFIVNHTLHCMLNEWKSQNALSLREKLDHMREMVTHEAFQDAVK    297

BSNT_05183___    300 KTGTAPFDTKRSCLLLMAKYRMIPFVAMASAVYQRVIEYKMRNRG    344
                     :...:...:::..:|.:||.|::..::.|::.||:.|||:.|.  
BPUM_3076        298 QVEPSKLTSRKRMILFLAKCRLVYPLSAAASSYQKWIEYQTRK--    340


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