Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05182 and BPUM_3075

See DNA alignment / Visit BSNT_05182 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:50
# Commandline: needle
#    -asequence pep-align/BSNT_05182___yveS.1.24716.seq
#    -bsequence pep-align/BPUM_3075.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05182___yveS-BPUM_3075.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05182___yveS-BPUM_3075.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05182___yveS
# 2: BPUM_3075
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 361
# Identity:     201/361 (55.7%)
# Similarity:   261/361 (72.3%)
# Gaps:          24/361 ( 6.6%)
# Score: 1071.5
# 
#
#=======================================

BSNT_05182___      1 MSLQSLKINFAEWLLLKVKYPSQYWLGAADQPVKAAAHQKKIILTLLPSH     50
                     |:||.||.:.|||||||||||.:|.|.....|.:  :|||||||||||.|
BPUM_3075          1 MTLQQLKAHAAEWLLLKVKYPLEYRLSRQSLPER--SHQKKIILTLLPGH     48

BSNT_05182___     51 DNLGDHAIAYASKAFLEQEYPDFDIVEVDMKDIYKSAKSLIRSRHPEDMV    100
                     ||||||||||||..||::.:|.:||:|||||:||:.|:.|.|.|||||:|
BPUM_3075         49 DNLGDHAIAYASYCFLKEHFPAYDIMEVDMKEIYRLARPLKRMRHPEDIV     98

BSNT_05182___    101 FIIGGGNMGDIYRYEEWTRRFIIKTFHDYRVVQLPATAHFSDTKKGRKEL    150
                     .|||||||||:||||||||:||:|||..|.|:|||||.||::||:|::|.
BPUM_3075         99 CIIGGGNMGDLYRYEEWTRQFIMKTFKSYPVIQLPATVHFTETKRGKREE    148

BSNT_05182___    151 KRAQKIYNAHPGLLLMARDETTYQFMKQHFQEKTILKQPDMVLYLDRSKT    200
                     :||.:.|..||.|||||||:|||.:|||||.::.:.|||||||.||.|..
BPUM_3075        149 RRAIQTYKHHPRLLLMARDQTTYTWMKQHFPDQDVWKQPDMVLTLDESTK    198

BSNT_05182___    201 PAEREGVYMCLREDQESVLQEEQRNRVKAALFEEFSEIKPFTTTIGRRVS    250
                     ..:||||.:|||||:|:.|.|::|.::|..:.|.:..:...|||||:||.
BPUM_3075        199 EPKREGVLLCLREDKEAYLTEKERQQLKQHIQETYDPVGLITTTIGKRVD    248

BSNT_05182___    251 RDTREQELEALWSKLQSAEAVVTDRLHGMIFCALTGTPCVVIRSFDHKVM    300
                     |.||..||.|||::|:.|:.|||||||||||||:|.|||||:||||||||
BPUM_3075        249 RTTRLDELSALWTELRKAQVVVTDRLHGMIFCAITKTPCVVLRSFDHKVM    298

BSNT_05182___    301 EGYQWLKDIPFMKLIEHPEPERVTAAVNELLT---KETPRAGFPRDVYFK    347
                     |||:|:..:||:.|::.|....|..|:::|:.   ::...||        
BPUM_3075        299 EGYEWVAHLPFLTLLKEPNEATVKEAIHQLMKTSGQKGEEAG--------    340

BSNT_05182___    348 GLRDKISGEAQ    358
                                
BPUM_3075        340 -----------    340


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