Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05170 and BPUM_3063
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:49
# Commandline: needle
# -asequence pep-align/BSNT_05170___sigL.1.24716.seq
# -bsequence pep-align/BPUM_3063___sigL.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05170___sigL-BPUM_3063___sigL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05170___sigL-BPUM_3063___sigL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05170___sigL
# 2: BPUM_3063___sigL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity: 229/444 (51.6%)
# Similarity: 311/444 (70.0%)
# Gaps: 17/444 ( 3.8%)
# Score: 1161.5
#
#
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BSNT_05170___ 1 MMDMKLQQVQVLKPQLTQELRQAITLLGYHSAELAEYIDELSLENPLIER 50
|.:.|||.||||..||||||||||||..:|.||.||:|:|:||||||||
BPUM_3063___s 1 -MSLNLQQEQVLKQVLTQELRQAITLLQLNSTELGEYLDQLALENPLIER 49
BSNT_05170___ 51 KETDTPPLSYHKTNKNRMNAQEAGLQLSNPQKT-----LQDALKQQSLDM 95
|:||:....|||.:::|| :.|.:| ||..||:|::|:
BPUM_3063___s 50 KDTDSYQPVYHKKSQDRM---------TEPYRTHQKESLQMYLKKQAIDL 90
BSNT_05170___ 96 NLTNTEKKIFNYLIHSLDSNGYLEEDVEEAARRLSVSAKETEAVLAKLQS 145
||....::||:::|.|:||||||.|.|:|.|..|.|||:|.||||.:|||
BPUM_3063___s 91 NLNEKNQRIFHFMIESIDSNGYLNEPVDEMAAVLKVSAEEVEAVLHQLQS 140
BSNT_05170___ 146 LEPAGIGARSLQECILLQLQRLPNRNEQAEMLVSAHFDAFAQKKWKALSV 195
|||||||||||||||||||:|...|..:||:::..||..||:|.||.::.
BPUM_3063___s 141 LEPAGIGARSLQECILLQLRRKKERWYEAELIIDEHFFLFARKAWKEIAA 190
BSNT_05170___ 196 ETGIPLHTIQDISDDIAALHPRPGLLFARPEQDVYIEPDIFITVKNGHIA 245
:|||.:.|:|.:.|:::.|.||||:.|:..|..:|||||:.|||...||.
BPUM_3063___s 191 KTGISMKTLQAVQDEVSQLEPRPGIHFSYEEDHMYIEPDVTITVVQDHIT 240
BSNT_05170___ 246 AELNTRSFPEIDLHPQYRTLLSSGSCQD--TVSYLSAKYQEWRWLSRALR 293
.|||.|:||:::::..|..::......: ...||..|.|::.||.:||:
BPUM_3063___s 241 FELNQRAFPDVEMNEGYFAMIQDQKRHEAYVYVYLKEKEQQYNWLIQALK 290
BSNT_05170___ 294 QRKQTITRIINELITRQKDFFLKGRSAMKPLTLREVADCLSLHESTVSRA 343
|||||:|.::.|:|..|.||||.|:..|||||::.:||.|.:|||||||.
BPUM_3063___s 291 QRKQTMTHVVREIILHQTDFFLTGKHKMKPLTMKRIADILQVHESTVSRT 340
BSNT_05170___ 344 IKGKTIQTPYGLFEMKLFFSAKAEASGDGDASNYAVKTHLENLINQEDKT 393
:|||.:||||||.|||.||.||.|.....:||:|.|||::..||..|:|.
BPUM_3063___s 341 VKGKMVQTPYGLMEMKQFFQAKLEGPSLEEASSYTVKTYIAELIQTENKK 390
BSNT_05170___ 394 KPLSDQKLVDLLYEQHGIQISRRTVAKYRDQMNIPSSAARKRYK 437
||.|||:::..|.:..||::||||:||||:|||:|||..||||.
BPUM_3063___s 391 KPYSDQQMMTQLQQTFGIRVSRRTIAKYREQMNLPSSTLRKRYD 434
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