Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06184 and BPUM_3059
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:39
# Commandline: needle
# -asequence pep-align/BSNT_06184___rocE.1.24716.seq
# -bsequence pep-align/BPUM_3059___rocC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06184___rocE-BPUM_3059___rocC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06184___rocE-BPUM_3059___rocC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06184___rocE
# 2: BPUM_3059___rocC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 474
# Identity: 275/474 (58.0%)
# Similarity: 366/474 (77.2%)
# Gaps: 10/474 ( 2.1%)
# Score: 1512.0
#
#
#=======================================
BSNT_06184___ 1 MNTNQDNGNQLQRTMKSRHLFMISLGGVIGTGFFLGTGFTINQAGPLGAV 50
.|:..|:|:|:|||||||||:||||||||.|||:|..|:||||.||:
BPUM_3059___r 1 ---MQEQHNELERSMKSRHLFMIALGGVIGTGLFLGSGLIIHQAGPGGAI 47
BSNT_06184___ 51 LSYLVGGFIMFLTMLCLGELAVAFPVSGSFQTYATKFISPAFGFAFGWLY 100
||:::|||:|:|.||||||||||.|.:||||.||||:|.|:.||..||||
BPUM_3059___r 48 LSFIIGGFLMYLVMLCLGELAVAMPTAGSFQEYATKYIGPSTGFMIGWLY 97
BSNT_06184___ 101 WLGWAVTCAIEFLSAGQLMQRWFPHIDVWIWCLVFAALMFILNAITTKAF 150
|..||.|..:||.|||.|:|||||.|.||:|||.|:.::|.:|||:.::|
BPUM_3059___r 98 WFSWACTIGLEFTSAGILLQRWFPDIPVWLWCLAFSVILFAVNAISARSF 147
BSNT_06184___ 151 AESEFWFSGIKILIILLFIILGGAAMFGLIDLKGGEQAPFLTHFYE-DGL 199
||:|||||.||:..||||||:|..|:||:|.|||||.||...|..: .||
BPUM_3059___r 148 AETEFWFSAIKVAAILLFIIIGIGAIFGMIHLKGGEPAPLFHHLTDHGGL 197
BSNT_06184___ 200 FPNGIKAMLITMITVNFAFQGTELIGVAAGESEDPEKTIPRSIKQTVWRT 249
||||:.|:|:||:||||:||||||:|:||||||.||||:||||:..:|||
BPUM_3059___r 198 FPNGVFAILLTMVTVNFSFQGTELVGIAAGESESPEKTLPRSIRNIIWRT 247
BSNT_06184___ 250 LVFFVLSIIVIAGMIPWKQAGVVESPFVAVFEQIGIPYAADIMNFVILIA 299
:|||||||.|:|.::||:.||.|:||||.|.:::|||||||||||:|:.|
BPUM_3059___r 248 MVFFVLSIAVLAALLPWQTAGAVDSPFVVVLDKVGIPYAADIMNFIIITA 297
BSNT_06184___ 300 LLSVANSGLYASTRILYAMANEGQAFKALGKTNQRGVPMYSLIVTMAVAC 349
:|||||||||||:|:|::::.:|:......|.::|.:|:.:|:|||.|:.
BPUM_3059___r 298 VLSVANSGLYASSRMLWSLSKDGKGPDFTKKLSKRKIPINALLVTMGVSA 347
BSNT_06184___ 350 LSLLTKFAQAETVYMVLLSLAGMSAQVGWITISLSQIMFRRKYIREGGKI 399
|||||.....:|||:.|:|::||...|.|::|.|||..||:::|::||.:
BPUM_3059___r 348 LSLLTSVVAPKTVYVWLISISGMVLVVVWMSICLSQYFFRKQFIKDGGDV 397
BSNT_06184___ 400 EDLKFKTPLYPVLPLIGLTLNTVVLISLAFDPEQRIALYCGVPFMVICYI 449
:||.|:|||||.:||.|.....:|||||.|..||||.||||||||..|||
BPUM_3059___r 398 KDLVFRTPLYPFVPLAGFIAFGIVLISLFFIEEQRIGLYCGVPFMAACYI 447
BSNT_06184___ 450 IYHVVIKKRQQANRQLEL------ 467
||::.||.:::|.|..|.
BPUM_3059___r 448 IYYLKIKPKEEAKRFAEEEGIPKT 471
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