Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05135 and BPUM_3058
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:47
# Commandline: needle
# -asequence pep-align/BSNT_05135___cggR.1.24716.seq
# -bsequence pep-align/BPUM_3058___cggR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05135___cggR-BPUM_3058___cggR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05135___cggR-BPUM_3058___cggR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05135___cggR
# 2: BPUM_3058___cggR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity: 256/345 (74.2%)
# Similarity: 290/345 (84.1%)
# Gaps: 30/345 ( 8.7%)
# Score: 1329.0
#
#
#=======================================
BSNT_05135___ 1 -------------------------MQYIRLTEPIGRRSLSASLGISERV 25
:|||||.||||||||:.|||:|||:
BPUM_3058___c 1 MNRLLEAQKKLLPDLLTVMQKRYDILQYIRLAEPIGRRSLATSLGLSERI 50
BSNT_05135___ 26 LRGEVQFLKEQNLVDIKTNGMTLTEEGYELLSVLEDTMKDVLGLTLLEKT 75
||.||||||||||:|:||:||.||.||:.||.:||..||||||||.||.|
BPUM_3058___c 51 LRAEVQFLKEQNLLDVKTSGMMLTSEGHALLEMLEGMMKDVLGLTFLENT 100
BSNT_05135___ 76 LKERLNLKDAIIVSGDSDQSPWVKKEMGRAAVACMKKRFSGKNIVAVTGG 125
||.:|.|::.:|||||||:|||||:|||||||.||||||:|.||||||||
BPUM_3058___c 101 LKRKLGLEEVMIVSGDSDESPWVKQEMGRAAVQCMKKRFTGNNIVAVTGG 150
BSNT_05135___ 126 TTIEAVAEMMTPDSKNRELLFVPARGGLGEDVKNQANTICAHMAEKASGT 175
||:||||||||||:|||:::||||||||||:|||||||||||||||||||
BPUM_3058___c 151 TTMEAVAEMMTPDAKNRDMMFVPARGGLGENVKNQANTICAHMAEKASGT 200
BSNT_05135___ 176 YRLLFVPGQLSQGAYSSIIEEPSVKEVLNTIKSASMLVHGIGEAKTMAQR 225
|:|||||||||:||||||||||||||||.||||::||:||||||||||.|
BPUM_3058___c 201 YKLLFVPGQLSEGAYSSIIEEPSVKEVLQTIKSSTMLIHGIGEAKTMAMR 250
BSNT_05135___ 226 RNTTLEDLKKIDDNDAVTEAFGYYFNADGEVVHKVHSVGMQLDDIDAIPD 275
|||..|||||||::||||||||||||.|||||||||||||||||:::||.
BPUM_3058___c 251 RNTPAEDLKKIDEHDAVTEAFGYYFNRDGEVVHKVHSVGMQLDDLESIPH 300
BSNT_05135___ 276 IIAVAGGSSKAEAIEAYFKKPRNTVLVTDEGAAKKLLRDE----- 315
|||||||||||.||||||||||.|||||||||||:|||:.
BPUM_3058___c 301 IIAVAGGSSKAGAIEAYFKKPRRTVLVTDEGAAKELLRESIDPSI 345
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