Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05118 and BPUM_3044
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:46
# Commandline: needle
# -asequence pep-align/BSNT_05118___yvbF.1.24716.seq
# -bsequence pep-align/BPUM_3044.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05118___yvbF-BPUM_3044.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05118___yvbF-BPUM_3044.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05118___yvbF
# 2: BPUM_3044
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity: 129/185 (69.7%)
# Similarity: 153/185 (82.7%)
# Gaps: 7/185 ( 3.8%)
# Score: 669.0
#
#
#=======================================
BSNT_05118___ 1 MKKTALDIIEHAEEHLIEKIAENMHTFGMPSTVGRVLGIIYMNRKPMTLS 50
|.|.||..|:.|::|.|||.||||:.||:.||||||||||:||||||||.
BPUM_3044 1 MDKQALGAIQKAQDHYIEKAAENMNAFGLSSTVGRVLGIIHMNRKPMTLE 50
BSNT_05118___ 51 ELSEATGMSKTRMSQVVREMIDANIAEKVFEKGVRKDLYDVEQDYYQTFI 100
||||||||||||||||||||:|.||||||:|||:||||||||||.|||||
BPUM_3044 51 ELSEATGMSKTRMSQVVREMLDLNIAEKVYEKGIRKDLYDVEQDQYQTFI 100
BSNT_05118___ 101 SLFAANWTKVVSKNKVLYKKLNRELSDLLQRDGLTPEAEEKVNQLLNELK 150
||||||||:|||||:..:||..:||.:||:::.|..|.|:|:|.||:|:|
BPUM_3044 101 SLFAANWTRVVSKNRKAHKKTCKELQELLEQEDLPEETEDKINLLLSEIK 150
BSNT_05118___ 151 EWLHYYDWLSRLIEFFESEEVFRYVPKTKESSSLK 185
|.|.||||:|||||||||||||::|||.
BPUM_3044 151 ESLDYYDWISRLIEFFESEEVFKHVPKP------- 178
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