Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05114 and BPUM_3040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:46
# Commandline: needle
# -asequence pep-align/BSNT_05114___opuCD.1.24716.seq
# -bsequence pep-align/BPUM_3040___opuCD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05114___opuCD-BPUM_3040___opuCD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05114___opuCD-BPUM_3040___opuCD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05114___opuCD
# 2: BPUM_3040___opuCD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 230
# Identity: 193/230 (83.9%)
# Similarity: 210/230 (91.3%)
# Gaps: 7/230 ( 3.0%)
# Score: 971.5
#
#
#=======================================
BSNT_05114___ 1 MEVLQQLGTYYSQNGGYVLQEFYRHFLMSVYGVLFAAIVGIPLGILIARY 50
|:.||||.|||.|||.|||:|||||||||.||||||||||||:||.:|.|
BPUM_3040___o 1 MDTLQQLWTYYQQNGSYVLEEFYRHFLMSAYGVLFAAIVGIPVGIFVAHY 50
BSNT_05114___ 51 RRLSGWVFAVTNVIQTIPALAMLAVLMLVMGLGANTVILSLFLYSLLPII 100
|:||.|:||:|||||||||||||:|||||:|||:||||||||||||||||
BPUM_3040___o 51 RKLSNWIFAITNVIQTIPALAMLSVLMLVLGLGSNTVILSLFLYSLLPII 100
BSNT_05114___ 101 RNTYTGIISIEHAYLESGKAMGMTKFQVLRMVELPLALSVIMAGLRTALV 150
|||||||:|||||||||||||||||:||||||||||||||||||||||||
BPUM_3040___o 101 RNTYTGIVSIEHAYLESGKAMGMTKWQVLRMVELPLALSVIMAGLRTALV 150
BSNT_05114___ 151 IAIGITAIGTFVGAGGLGDIIVRGSNATNGTAIILAGAIPTALMAVIADL 200
|||||||||||||||||||||:|||||||||||||||||||||||:||||
BPUM_3040___o 151 IAIGITAIGTFVGAGGLGDIIIRGSNATNGTAIILAGAIPTALMAIIADL 200
BSNT_05114___ 201 VMGWLERALSPIKKRK------KKNLAGAA 224
|||||||.|||..|:| :||:..|
BPUM_3040___o 201 VMGWLERYLSPTNKKKERKALAEKNMTSA- 229
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