Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05105 and BPUM_3039

See DNA alignment / Visit BSNT_05105 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:46
# Commandline: needle
#    -asequence pep-align/BSNT_05105.1.24716.seq
#    -bsequence pep-align/BPUM_3039.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05105-BPUM_3039.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05105-BPUM_3039.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05105
# 2: BPUM_3039
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 109
# Identity:      84/109 (77.1%)
# Similarity:    94/109 (86.2%)
# Gaps:           4/109 ( 3.7%)
# Score: 423.0
# 
#
#=======================================

BSNT_05105         1 MNQSEMCPRFEKAVDILSKRWVALIVFQLLNGSQRFSEIEAALPNLSGRV     50
                     ||||:|||||||||::||||||||||||||:|.||||||||||.||||||
BPUM_3039          1 MNQSDMCPRFEKAVELLSKRWVALIVFQLLSGPQRFSEIEAALTNLSGRV     50

BSNT_05105        51 LSERLKELELEGVVKRDVIPETPVRIEYSLTDKGKALAPILGEISKWATE    100
                     |||||||||..|:|||:|..||||||||||||.|.:|||:..|||||:||
BPUM_3039         51 LSERLKELEAAGIVKREVFAETPVRIEYSLTDMGSSLAPVFEEISKWSTE    100

BSNT_05105       101 WIDPSFLD-    108
                     ||.   |: 
BPUM_3039        101 WIT---LES    106


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