Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05093 and BPUM_3032

See DNA alignment / Visit BSNT_05093 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:45
# Commandline: needle
#    -asequence pep-align/BSNT_05093___yvaK.1.24716.seq
#    -bsequence pep-align/BPUM_3032___bioH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05093___yvaK-BPUM_3032___bioH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05093___yvaK-BPUM_3032___bioH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05093___yvaK
# 2: BPUM_3032___bioH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 248
# Identity:     212/248 (85.5%)
# Similarity:   230/248 (92.7%)
# Gaps:           2/248 ( 0.8%)
# Score: 1169.0
# 
#
#=======================================

BSNT_05093___      1 MKVVTPKPFTFKGGDKAVLLLHGFTGNTADVRMLGRYLNERGYTCHAPQY     50
                     ||||||||||||||:|||||||||||||||||||||||||||||||||||
BPUM_3032___b      1 MKVVTPKPFTFKGGEKAVLLLHGFTGNTADVRMLGRYLNERGYTCHAPQY     50

BSNT_05093___     51 EGHGVPPEELVHTGPEDWWKNVMDGYEYLKSEGYESIAACGLSLGGVFSL    100
                     :|||||||||||.||:||||:|.:.|::||.||:|.||.|||||||||||
BPUM_3032___b     51 KGHGVPPEELVHFGPDDWWKDVQEAYQFLKDEGFEEIAVCGLSLGGVFSL    100

BSNT_05093___    101 KLGYTVPIKGIVPMCAPMHIKSEEVMYQGVLSYARNYKKFEGKSPEQIEE    150
                     |||||||:||||||||||:||||||||||||.||||||||||||.:|||:
BPUM_3032___b    101 KLGYTVPVKGIVPMCAPMYIKSEEVMYQGVLEYARNYKKFEGKSEDQIEQ    150

BSNT_05093___    151 EMKEFEKTPMNTLKALQDLIADVRNNVDMIYSPTFVVQARHDHMINTESA    200
                     ||:||:||||:|||:||.|||||||||||||||||||||||||||||:||
BPUM_3032___b    151 EMEEFKKTPMDTLKSLQALIADVRNNVDMIYSPTFVVQARHDHMINTDSA    200

BSNT_05093___    201 NIIYNEVETDDKQLKWYEESGHVITLDKERDLVHQDVYEFLEKLDW--    246
                     ||||||||||.|.|.|||||||.|||||||:.||||||.|||.|||  
BPUM_3032___b    201 NIIYNEVETDQKHLTWYEESGHAITLDKEREKVHQDVYAFLESLDWSI    248


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.