Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05093 and BPUM_3032

See Amino acid alignment / Visit BSNT_05093 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:46
# Commandline: needle
#    -asequence dna-align/BSNT_05093___yvaK.1.24716.seq
#    -bsequence dna-align/BPUM_3032___bioH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05093___yvaK-BPUM_3032___bioH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05093___yvaK-BPUM_3032___bioH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05093___yvaK
# 2: BPUM_3032___bioH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 751
# Identity:     572/751 (76.2%)
# Similarity:   572/751 (76.2%)
# Gaps:          14/751 ( 1.9%)
# Score: 2139.0
# 
#
#=======================================

BSNT_05093___      1 ATGAAAGTTGTGACACCAAAACCATTTACATTTAAAGGCGGAGACAAAGC     50
                     |||||||||||.|||||||||||||||||.||||||||.|||||.||.||
BPUM_3032___b      1 ATGAAAGTTGTTACACCAAAACCATTTACGTTTAAAGGTGGAGAAAAGGC     50

BSNT_05093___     51 GGTGCTTTTGCTGCATGGCTTTACAGGAAATACAGCGGATGTAAGGATGC    100
                     |||||||.|.||.||.||.|||||.||.||||||||.|||||..|.||||
BPUM_3032___b     51 GGTGCTTCTTCTTCACGGTTTTACTGGGAATACAGCCGATGTTCGAATGC    100

BSNT_05093___    101 TGGGACGATATTTGAATGAACGCGGCTATACGTGCCACGCGCCTCAATAT    150
                     |.||.||.||||||||.|||.|.|||||||||||.||.||.||.||||||
BPUM_3032___b    101 TAGGCCGTTATTTGAACGAAAGAGGCTATACGTGTCATGCACCACAATAT    150

BSNT_05093___    151 GAAGGACATGGCGTCCCGCCTGAAGAACTTGTACATACGGGGCCCGAAGA    200
                     .|||||||.||.||.||.||.|||||.|||||.|||...||.||.||.||
BPUM_3032___b    151 AAAGGACACGGTGTGCCACCAGAAGAGCTTGTCCATTTTGGACCGGATGA    200

BSNT_05093___    201 CTGGTGGAAAAACGTAATGGATGGCTATGAATACTTAAAATCTGAAGGCT    250
                     |||||||||..|.|||...||.|.||||.|||.|||.|||..||||||||
BPUM_3032___b    201 CTGGTGGAAGGATGTACAAGAAGCCTATCAATTCTTGAAAGATGAAGGCT    250

BSNT_05093___    251 ATGAGAGCATTGCTGCCTGCGGACTGTCGCTTGGCGGGGTTTTTTCGCTG    300
                     .||||...|||||.|..||||||||.||.||.||.||.||||||||..||
BPUM_3032___b    251 TTGAGGAAATTGCGGTTTGCGGACTATCCCTCGGAGGAGTTTTTTCATTG    300

BSNT_05093___    301 AAATTGGGTTACACTGTACCCATAAAGGGAATTGTCCCAATGTGCGCACC    350
                     |||||.||||||||||||||..|||||||||||||.||.|||||.|||||
BPUM_3032___b    301 AAATTAGGTTACACTGTACCTGTAAAGGGAATTGTACCTATGTGTGCACC    350

BSNT_05093___    351 GATGCATATTAAGAGTGAAGAGGTTATGTATCAAGGCGTTCTTTCATACG    400
                     .|||.|.||.||.||||||||.||.|||||.||.||.||.||...|||.|
BPUM_3032___b    351 TATGTACATAAAAAGTGAAGAAGTCATGTACCAGGGTGTACTAGAATATG    400

BSNT_05093___    401 CTCGCAATTACAAAAAGTTTGAGGGGAAAAGCC--CGGAGCAAATTGAAG    448
                     |.||.||.||.||.||.||.|||||  .|||.|  .|||.|||||||||.
BPUM_3032___b    401 CCCGTAACTATAAGAAATTCGAGGG--TAAGTCAGAGGACCAAATTGAAC    448

BSNT_05093___    449 AGGAAATGAAAGAATTCGAAAAAACGCCGATGAATACCCTCAAG-GCACT    497
                     ||||||||.||||.|||.|.||||||||.|||.||||.||.||| || ||
BPUM_3032___b    449 AGGAAATGGAAGAGTTCAAGAAAACGCCAATGGATACACTTAAGAGC-CT    497

BSNT_05093___    498 GCAAG-ACTTAATTGCTGATGTGCGGAATAATGTCGATATGATTTATTCA    546
                     .|||| || |.|||||.|||||..|.||.||||||||.||||||||||||
BPUM_3032___b    498 TCAAGCAC-TCATTGCAGATGTTAGAAACAATGTCGACATGATTTATTCA    546

BSNT_05093___    547 CCGACATTTGTGGTGCAGGCCCGTCATGACCACATGATTAATACCGAAAG    596
                     ||.||.|||||.||.|||||.|||||.||.||.|||||||||||.||.||
BPUM_3032___b    547 CCTACTTTTGTTGTTCAGGCACGTCACGATCATATGATTAATACAGACAG    596

BSNT_05093___    597 CGCCAATATTATTTACAACGAAGTGGAAACTGATGATAAACAGCTGAAAT    646
                     .||.|||||.||.||.||||||||.||.||.|||.|.||.||..|||.||
BPUM_3032___b    597 TGCGAATATCATCTATAACGAAGTAGAGACAGATCAAAAGCATTTGACAT    646

BSNT_05093___    647 GGTACGAGGAATCAGGGCATGTCATTACACTCGACAAAGAACGTGACCTC    696
                     ||||.||.||||||||.||||..||.||.||.||.|||||.||.||....
BPUM_3032___b    647 GGTATGAAGAATCAGGCCATGCGATCACGCTTGATAAAGAGCGCGAGAAG    696

BSNT_05093___    697 GTCCATCAGGATGTGTATGAATTTTTAGAGAAGCTCGATTGGTAA-----    741
                     ||.|||||||||||.||||.|||.|||||....||.|||||||.|     
BPUM_3032___b    697 GTTCATCAGGATGTATATGCATTCTTAGAATCACTTGATTGGTCAATTTA    746

BSNT_05093___    741 -    741
                      
BPUM_3032___b    747 A    747


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