Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02774 and BPUM_3015
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:25
# Commandline: needle
# -asequence pep-align/BSNT_02774___pksA.1.24716.seq
# -bsequence pep-align/BPUM_3015___pksA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02774___pksA-BPUM_3015___pksA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02774___pksA-BPUM_3015___pksA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02774___pksA
# 2: BPUM_3015___pksA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity: 80/207 (38.6%)
# Similarity: 127/207 (61.4%)
# Gaps: 8/207 ( 3.9%)
# Score: 378.0
#
#
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BSNT_02774___ 1 MPKQIDHEKRRKQIAEATWRVILERGMEGASARNIAKEAGLSLGALRHYF 50
|||.:||.|:::::|:|..|||.:.|:|.||.|.:|.|||:|.|::||||
BPUM_3015___p 1 MPKIVDHHKQKQKVAQAAMRVIKQDGLENASVRKVAVEAGISAGSMRHYF 50
BSNT_02774___ 51 STQDELLAFAMKLVQEKVTDRIKDIAVRDLLPKEKVLQILLEMVPTNEET 100
|||.||..|:|.|:||:|.:|:..:.:.. ..:|.||.:|.:::|.:||.
BPUM_3015___p 51 STQQELFLFSMTLIQERVKERMTGLQLNG-STEENVLALLEQVLPLDEER 99
BSNT_02774___ 101 IREMEVWFAFTAYARHKKDMFDAN---HDGIFSGMRNLIAYLDESDLLKQ 147
..|||||.|||..:..:.|:...| :|.:|...:..:..|.|..||..
BPUM_3015___p 100 RFEMEVWQAFTVKSMTEPDLQPLNAKMYDELFQMTQYCLMTLKEDGLLLD 149
BSNT_02774___ 148 NADKDIEAERLYALVDGLALHAMLDPVRVNKDRIKRVIMQHVESICVEGK 197
:.|..:|.|||||:::||||:.:|.|.|:....|:.|:..|::||..:..
BPUM_3015___p 150 HIDLFVETERLYAVINGLALNGILQPHRLPPQLIRSVLQMHLQSITKKDM 199
BSNT_02774___ 198 RETEEKE 204
..:
BPUM_3015___p 200 SPS---- 202
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