Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02773 and BPUM_3014

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:25
# Commandline: needle
#    -asequence pep-align/BSNT_02773___ymcC.1.24716.seq
#    -bsequence pep-align/BPUM_3014.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02773___ymcC-BPUM_3014.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02773___ymcC-BPUM_3014.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02773___ymcC
# 2: BPUM_3014
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 187
# Identity:      91/187 (48.7%)
# Similarity:   130/187 (69.5%)
# Gaps:           7/187 ( 3.7%)
# Score: 460.5
# 
#
#=======================================

BSNT_02773___      1 MNGIAWMIVFCEIAFWVVIVLGLAVRYVFKRHTLGLLFLGLTPVIDLILL     50
                     |.|:  :||.|||.||:.|::||.:||||::...|..||..||::|||||
BPUM_3014          1 MVGL--LIVACEIGFWLFILVGLTLRYVFRQKKWGAFFLICTPILDLILL     48

BSNT_02773___     51 AATGVDLYRGASATAAHGIAAVYIGISIAYGKQMIQWADEKFQYYVTKKG    100
                     |||.:||.:||.|:..||:||||||:|:|:|.||::|||.:|.|... .|
BPUM_3014         49 AATYLDLRQGAVASVIHGLAAVYIGVSLAFGHQMVKWADVRFAYRFA-GG     97

BSNT_02773___    101 AKPLKR--FGMDHAKHGAKGWLRHVLAYLIGAGLLAGMIYFINDSARTEA    148
                     .||.:|  :|.:.:.:...||.||:::|:||||||.|:.|.|....||||
BPUM_3014         98 PKPKERPKYGKERSVYEIVGWTRHLVSYVIGAGLLFGLSYLIQAPERTEA    147

BSNT_02773___    149 LSGILKLWTVIIGIDFLITASYFIWPKKEKASANLRS    185
                     |..:.::|.:::||||:|:.||.|||||.  ..|:.|
BPUM_3014        148 LIQLARVWGMVLGIDFVISISYVIWPKKH--PQNIAS    182


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