Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02773 and BPUM_3014
See
DNA alignment /
Visit
BSNT_02773 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:25
# Commandline: needle
# -asequence pep-align/BSNT_02773___ymcC.1.24716.seq
# -bsequence pep-align/BPUM_3014.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02773___ymcC-BPUM_3014.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02773___ymcC-BPUM_3014.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02773___ymcC
# 2: BPUM_3014
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 187
# Identity: 91/187 (48.7%)
# Similarity: 130/187 (69.5%)
# Gaps: 7/187 ( 3.7%)
# Score: 460.5
#
#
#=======================================
BSNT_02773___ 1 MNGIAWMIVFCEIAFWVVIVLGLAVRYVFKRHTLGLLFLGLTPVIDLILL 50
|.|: :||.|||.||:.|::||.:||||::...|..||..||::|||||
BPUM_3014 1 MVGL--LIVACEIGFWLFILVGLTLRYVFRQKKWGAFFLICTPILDLILL 48
BSNT_02773___ 51 AATGVDLYRGASATAAHGIAAVYIGISIAYGKQMIQWADEKFQYYVTKKG 100
|||.:||.:||.|:..||:||||||:|:|:|.||::|||.:|.|... .|
BPUM_3014 49 AATYLDLRQGAVASVIHGLAAVYIGVSLAFGHQMVKWADVRFAYRFA-GG 97
BSNT_02773___ 101 AKPLKR--FGMDHAKHGAKGWLRHVLAYLIGAGLLAGMIYFINDSARTEA 148
.||.:| :|.:.:.:...||.||:::|:||||||.|:.|.|....||||
BPUM_3014 98 PKPKERPKYGKERSVYEIVGWTRHLVSYVIGAGLLFGLSYLIQAPERTEA 147
BSNT_02773___ 149 LSGILKLWTVIIGIDFLITASYFIWPKKEKASANLRS 185
|..:.::|.:::||||:|:.||.|||||. ..|:.|
BPUM_3014 148 LIQLARVWGMVLGIDFVISISYVIWPKKH--PQNIAS 182
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.