Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04477 and BPUM_3013

See DNA alignment / Visit BSNT_04477 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:02
# Commandline: needle
#    -asequence pep-align/BSNT_04477___mntA.1.24716.seq
#    -bsequence pep-align/BPUM_3013___mntA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04477___mntA-BPUM_3013___mntA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04477___mntA-BPUM_3013___mntA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04477___mntA
# 2: BPUM_3013___mntA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 318
# Identity:      96/318 (30.2%)
# Similarity:   168/318 (52.8%)
# Gaps:          18/318 ( 5.7%)
# Score: 402.0
# 
#
#=======================================

BSNT_04477___      1 MRRGL---MAAVLFATFALTGCGT--DSAGKSADQQLQVTATTSQIADAA     45
                     |::..   :.||..|...:|||.|  :::||. |..|:|..|.|.:.|..
BPUM_3013___m      1 MKKVFAIRLTAVFIALMIITGCSTKQNNSGKD-DGTLKVVTTYSILYDIV     49

BSNT_04477___     46 ENIGGKHVKVTSLMGPGVDPHLYKASQGDTKKLMSADVVLYSGLHLE---     92
                     :.:||:||.:.|::..|.|||.:.....|.:....||:|||:||:||   
BPUM_3013___m     50 KEVGGEHVSIHSIVPIGTDPHEFDPLPKDVQHTTDADLVLYNGLNLETGN     99

BSNT_04477___     93 GKMEDVLQKIGEQQQSAAVAE---AIPKNKLIPAGEGKTFDPHVWFSIPL    139
                     |..:.:|:..|:....|.|||   .:....|...|.....|||.|.::..
BPUM_3013___m    100 GWFQKLLESSGKDGDDAPVAEMSKGVKVKHLSSKGLESQQDPHAWLNVEN    149

BSNT_04477___    140 WIYAVDEIEAQFSKAMPQHADAFRKNAKEYKEDLQYLDKWSRKEIAHIPE    189
                     .|...........||.|:|.:.:.|||:.|.:.||.|...::.:...:|:
BPUM_3013___m    150 GILYAKNARDALIKADPEHQEDYEKNAEAYIKKLQTLHNEAKDKFDQLPK    199

BSNT_04477___    190 KSRVLVTAHDAFAYFGNEYGFKVKGLQGLSTDSDYGLRDVQELVDLLTEK    239
                     ..:.|||:..||.||.:.||.:...:..::|:::.....::.::..:.:.
BPUM_3013___m    200 DKKRLVTSEGAFKYFADAYGLEAGYIWEINTENEGTPGQMKRIIHFVKDH    249

BSNT_04477___    240 QIKAVFVESSVSEKSINAVVEGAKEKGHTVTIGGQLYSDAMGEKGTKEGT    289
                     |:.|:|:|:||.::|:.::.|   |.|  |.|.|::::|::|:||....:
BPUM_3013___m    250 QVPALFLETSVDQRSLESLSE---ETG--VPIKGKVFTDSIGKKGEDGDS    294

BSNT_04477___    290 YEGMFRHNINTITKALK-    306
                     |..|.:.||:||.|.|. 
BPUM_3013___m    295 YYKMMKWNIDTIYKGLSS    312


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