Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04475 and BPUM_3012

See DNA alignment / Visit BSNT_04475 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:02
# Commandline: needle
#    -asequence pep-align/BSNT_04475___mntC.1.24716.seq
#    -bsequence pep-align/BPUM_3012___mntD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04475___mntC-BPUM_3012___mntD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04475___mntC-BPUM_3012___mntD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04475___mntC
# 2: BPUM_3012___mntD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 441
# Identity:     110/441 (24.9%)
# Similarity:   175/441 (39.7%)
# Gaps:         157/441 (35.6%)
# Score: 468.5
# 
#
#=======================================

BSNT_04475___      1 ------MFESLWLQLQHPNTQWVLAGTLLLGTASGVLGSFVLLRKQSLIG     44
                           :||..:||.       .|..::::|...||:|.|::||..:|:|
BPUM_3012___m      1 MEFLTGLFEYAFLQK-------ALFTSVMVGIICGVIGCFIILRGMALMG     43

BSNT_04475___     45 DAMAHSALPGVCLAFLFTGQKSLPFFLLGAALAGLLGTFCIQLIPRLSKT     94
                     ||::|:.||||.::::.    .:.|| .||.|.|:|....|..:.:.|:.
BPUM_3012___m     44 DAISHAVLPGVAISYML----GINFF-FGAVLTGVLTAIGIGYVSQNSRI     88

BSNT_04475___     95 KEDSAIGIVLSVFFGVGIILLTYIQQQGAGSQSGLDSFLFGQAASLVRQD    144
                     |.|||||||.:.||.:||||:|:::     |.|.|...|||...::...|
BPUM_3012___m     89 KNDSAIGIVFTAFFSIGIILITFLK-----SSSDLYHILFGNVLAVRSSD    133

BSNT_04475___    145 IILIAGISAALLLLCIVFFKEFTLITFDLAFAKGLGIPVRFLNGLLACLI    194
                     :.:..||...:||..|||:||..:.:||...:...|:|.|.::..|..|:
BPUM_3012___m    134 MWITLGIGIFILLAVIVFYKELLISSFDPVISSVYGLPNRMIHYFLMTLL    183

BSNT_04475___    195 VCAVVIGLQTVGVILMAAMLITPAIAARYWTERLTGMIVIAGITGGVSGV    244
                     ....|..|||||:||:.|||||||..|...|:||..||.::...|.||.|
BPUM_3012___m    184 TLVTVASLQTVGIILVVAMLITPAATAYLLTDRLWIMIYLSAFFGAVSAV    233

BSNT_04475___    245 AGTLLSTTMKGMATGPLMILSATLLFLFSMICAPKRGLAAKSIRLMRLRR    294
                     ||..||.|. .:::|..::|.||:||..:.|.:||:|:..:|::..:.|.
BPUM_3012___m    234 AGLGLSFTY-NLSSGASIVLVATILFGSAFIFSPKQGILWRSLKSKQKRT    282

BSNT_04475___    295 RTSREQVLLEIYEQYEKNNLCVTVESVRKKRRLSSSLCLKALNDLEQERC    344
                     :..::..:                                          
BPUM_3012___m    283 QLKKDASM------------------------------------------    290

BSNT_04475___    345 IERIENGIWQITSKGIEKGYHTALKQRMYEVYLMHEMDLANIESDQDCFD    394
                                                                       
BPUM_3012___m    290 --------------------------------------------------    290

BSNT_04475___    395 PDRLPRETRERLYSLLKLYGRMPEHRKASHDAKKGQIANEF    435
                                                              
BPUM_3012___m    290 -----------------------------------------    290


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