Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04999 and BPUM_3010
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:44
# Commandline: needle
# -asequence pep-align/BSNT_04999___copB.1.24716.seq
# -bsequence pep-align/BPUM_3010.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04999___copB-BPUM_3010.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04999___copB-BPUM_3010.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04999___copB
# 2: BPUM_3010
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 707
# Identity: 456/707 (64.5%)
# Similarity: 577/707 (81.6%)
# Gaps: 16/707 ( 2.3%)
# Score: 2354.0
#
#
#=======================================
BSNT_04999___ 1 ---MKQEYVLDGLDCSNCAQKIENGVKGIKGIDGCAVNFAASTLTVSADG 47
:|.||||:||||.|||:|||.||..:.|::.|:||||..||||:...
BPUM_3010 1 MKKIKDEYVLNGLDCGNCARKIETGVSKMDGVEACSVNFATGTLTVTHAD 50
BSNT_04999___ 48 KEEQWVTNKVEKKVKSIDPHVTVRQK---HIKKSADDGYRNRMVNMLIRM 94
|:|. ::.::||.|:||:|||:|..| | ....|.|.:| :..:::::
BPUM_3010 51 KQET-MSKRIEKTVQSIEPHVSVSPKEEGH-HHDHDHGTKN-LRTIVLKL 97
BSNT_04999___ 95 AAAVILGATAYLV-HSGTIELFLFLAAYLIIGGDIMIRAVKNIIRGQVFD 143
....::|..|:.: ..|.::..:|.||||::|||::.:|:|||:||||||
BPUM_3010 98 IGGAVIGTAAFFIPEDGVLKFLMFFAAYLLVGGDVVFKALKNIVRGQVFD 147
BSNT_04999___ 144 EHFLMALATIGAFLIQQYPEGVAVMLFYQIGELFQGAAVSRSRKSISALM 193
|:|||.:||:|||:||||||.:|||||||||||||||||:|||:|||.||
BPUM_3010 148 ENFLMTIATVGAFVIQQYPEALAVMLFYQIGELFQGAAVNRSRRSISELM 197
BSNT_04999___ 194 DIRPDYANLKTKNGIEQVSPEDVQTGDIIVVNPGESIPLDGKVVQGSAMV 243
:|||:|||||..|..::|:||:|:.||.|||.|||.|||||.|::|.::|
BPUM_3010 198 NIRPEYANLKVGNETKKVNPEEVKAGDRIVVKPGEKIPLDGLVIEGFSLV 247
BSNT_04999___ 244 DTSALTGESVPRKAAVGQDVMSGFINQNGVLHIEVTKSYQESAVSKILDL 293
||||||||||||....|::|::||:|||.:|.|||.|...||||:|||||
BPUM_3010 248 DTSALTGESVPRDVEAGKEVLAGFVNQNSILEIEVQKELSESAVTKILDL 297
BSNT_04999___ 294 VQNASSRKARTENFITKFAKYYTPAVVIIAVLLAFVPPLVLSGAALSDWV 343
|:|||||||:|||||||||||||||||::|:||||||||::..|.|||||
BPUM_3010 298 VENASSRKAQTENFITKFAKYYTPAVVVLALLLAFVPPLLIPSAQLSDWV 347
BSNT_04999___ 344 YRALIFLVISCPCALVVSIPLGFFGGIGAASKAGVLVKGSNYLEALNQVK 393
||||:|||||||||||||||||||||||||||.|:||||||||||||.||
BPUM_3010 348 YRALVFLVISCPCALVVSIPLGFFGGIGAASKRGILVKGSNYLEALNSVK 397
BSNT_04999___ 394 YAVFDKTGTLTKGSFEVTEIKPA-EGFTKDRLLEAAAYAELHSQHPIAES 442
|||||||||||||:|.||.|..| :.::::.||..||.||.||.||||||
BPUM_3010 398 YAVFDKTGTLTKGNFTVTNISTASDKWSEEELLSFAALAEAHSSHPIAES 447
BSNT_04999___ 443 VRKAYGKMLSSDEIESYEEISGHGIFAKVNGNEILAGNKKLMEREQIEDV 492
::.||...|...:||:||:|:||||.|.::|:.:||||.:|||||.|...
BPUM_3010 448 IKAAYSLPLDESQIEAYEDIAGHGIKATISGSHVLAGNHRLMEREGIVYE 497
BSNT_04999___ 493 PDENAGTIVHVAVDQRYAGAIIIADEIKEDAAQAVADLKSLGIKQTAMLT 542
.::.:||:|::|::..:||:|:||||:|:||.:||:.||:.|| ||.|||
BPUM_3010 498 KEKRSGTVVYMAINGEFAGSILIADELKDDAIEAVSALKASGI-QTVMLT 546
BSNT_04999___ 543 GDSKQTGEAVGKQLGIGEVYAELLPQDKVAQVEALEAKLSPNEKLIFVGD 592
||:||.|.||.||:||.||:|||||||||.::|.::.|.:|.|||:||||
BPUM_3010 547 GDAKQVGTAVAKQIGIDEVHAELLPQDKVTKLEEIDQKKAPQEKLLFVGD 596
BSNT_04999___ 593 GINDTPVLARADIGIAMGGLGSDAAVEAADIVLMTDQPSKIAEAIRIAKR 642
||||||||||||||||||||||||||||||||:|||||:|:||||.:|||
BPUM_3010 597 GINDTPVLARADIGIAMGGLGSDAAVEAADIVIMTDQPTKVAEAIAVAKR 646
BSNT_04999___ 643 TRRIVWQNIGFALGVKAIFLILGAFGIATMWEAVFSDVGVTLLAVANAMR 692
|||||||||.||||:|.|||:||||||||||||||||||||:|||.||||
BPUM_3010 647 TRRIVWQNIAFALGIKGIFLLLGAFGIATMWEAVFSDVGVTVLAVLNAMR 696
BSNT_04999___ 693 VMRLKNK 699
||:
BPUM_3010 697 VMK---- 699
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