Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04996 and BPUM_3009
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:43
# Commandline: needle
# -asequence pep-align/BSNT_04996___bdbD.1.24716.seq
# -bsequence pep-align/BPUM_3009___bdbD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04996___bdbD-BPUM_3009___bdbD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04996___bdbD-BPUM_3009___bdbD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04996___bdbD
# 2: BPUM_3009___bdbD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 228
# Identity: 128/228 (56.1%)
# Similarity: 167/228 (73.2%)
# Gaps: 6/228 ( 2.6%)
# Score: 688.0
#
#
#=======================================
BSNT_04996___ 1 MKKK--QQSSAKFAVILTVVVVVLLAAIVIINNKTEQGNDAVSGQPSIKG 48
|.|| |.||.|||||||::..:|:...|:|.||..|....|..:|||:|
BPUM_3009___b 1 MSKKNNQSSSIKFAVILTIIAALLIGIFVVIGNKNSQEAQTVDSKPSIQG 50
BSNT_04996___ 49 QPVLGKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFV 98
|||:|..:|.|.:||||||||||||.|.:|||||::.|:||||||.|||:
BPUM_3009___b 51 QPVIGDKNAAVQIVEFGDYKCPSCKSFETDIFPKLKADYIDKGDVSFSFI 100
BSNT_04996___ 99 NVMF--HGKGSRLAALASEEVWKEDPDSFWDFHEKLFEKQPDTEQEWVTP 146
|:.. ||.|:.||||||||||||||.:||.|||.:::.|||:|.|||||
BPUM_3009___b 101 NLPLPVHGDGAVLAALASEEVWKEDPKNFWAFHEAVYQAQPDSEAEWVTP 150
BSNT_04996___ 147 GLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKMNIQATPTIY 196
..|.:|||.||||..:.||::|.|:|:..|:..|:.|..|..:.:||||:
BPUM_3009___b 151 AKLTELAKKTTKIDTDKLKDHLSKKTYQPQLNTDNQLVNKYKVNSTPTIF 200
BSNT_04996___ 197 VNDKVIKNFADYDEIKETIEKELKGK-- 222
:|:|.::||.|||||||.|::|||||
BPUM_3009___b 201 INNKQVQNFYDYDEIKELIDQELKGKKS 228
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