Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04981 and BPUM_3004

See DNA alignment / Visit BSNT_04981 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:42
# Commandline: needle
#    -asequence pep-align/BSNT_04981___yvgN.1.24716.seq
#    -bsequence pep-align/BPUM_3004.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04981___yvgN-BPUM_3004.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04981___yvgN-BPUM_3004.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04981___yvgN
# 2: BPUM_3004
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity:     194/281 (69.0%)
# Similarity:   224/281 (79.7%)
# Gaps:          21/281 ( 7.5%)
# Score: 1025.5
# 
#
#=======================================

BSNT_04981___      1 ----------------MPWFGLGVFKVENGNEATESVKAAIKNGYRSIDT     34
                                     ||||||||||||:||:..::|||||:||||||||
BPUM_3004          1 MVKSLNDTVTLNNGVEMPWFGLGVFKVEDGNQVVDAVKAAIRNGYRSIDT     50

BSNT_04981___     35 AAIYKNEEGVGIGIKESGVAREELFITSKVWNEEQGYETTLAAFEKSLER     84
                     ||:||||.|||..||||||.||:|||||||||.:|||:..||||:.||.|
BPUM_3004         51 AAVYKNETGVGKAIKESGVKREDLFITSKVWNTDQGYDKALAAFDASLNR    100

BSNT_04981___     85 LQLDYLDLYLIHWPG--KDKYKDTWRALEKLYKDGKIRAIGVSNFQVHHL    132
                     |.|||||||||||||  .:.:|||||||||||||||:||||||||.:.||
BPUM_3004        101 LGLDYLDLYLIHWPGPNAETFKDTWRALEKLYKDGKVRAIGVSNFYIQHL    150

BSNT_04981___    133 EELLKDAEIKPMVNQVEFHPRLTQKELRDYCKAQGIQLEAWSPLMQGQLL    182
                     ||||||||:.|.||||||||:||..|||.|.|.:|||:|||||||||:||
BPUM_3004        151 EELLKDAEVVPAVNQVEFHPKLTLVELRQYAKEKGIQIEAWSPLMQGKLL    200

BSNT_04981___    183 DNEVLTQIAEKHNKSVAQVILRWDLQHEVVTIPKSIKEHRIIENADIFDF    232
                     |::||..:|.::||||||||||||||..||||||||.|.||.:|||||||
BPUM_3004        201 DHDVLKDMAARYNKSVAQVILRWDLQSGVVTIPKSINEERIKQNADIFDF    250

BSNT_04981___    233 ELSQEDMDKIDALNKDERVGPNPDELLF---    260
                     |||:|||:||||||.:||||.||:.:..   
BPUM_3004        251 ELSKEDMEKIDALNNNERVGSNPETMTVGFE    281


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