Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04976 and BPUM_3001
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:42
# Commandline: needle
# -asequence pep-align/BSNT_04976___yvgJ.1.24716.seq
# -bsequence pep-align/BPUM_3001.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04976___yvgJ-BPUM_3001.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04976___yvgJ-BPUM_3001.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04976___yvgJ
# 2: BPUM_3001
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 619
# Identity: 401/619 (64.8%)
# Similarity: 499/619 (80.6%)
# Gaps: 5/619 ( 0.8%)
# Score: 2173.5
#
#
#=======================================
BSNT_04976___ 1 MKGTFFHNQRFLCFSILFMWIKTYVIYKLGFDLQIDTLLEELMLLVNPLS 50
|| .||.|..||.:||||||:|||:||:|||.::...|..|.:||:||||
BPUM_3001 1 MK-AFFKNHWFLVYSILFMWMKTYIIYQLGFHIRTANLFHEWLLLINPLS 49
BSNT_04976___ 51 FILPLFGIGLLLKGNKQRAFLLIANLVLTVILISNTIFYGFYIDFITIPV 100
|:||||||.|.|...||:.|||.||.:||.||||||||||||||||||||
BPUM_3001 50 FLLPLFGIALFLNETKQKVFLLTANFILTAILISNTIFYGFYIDFITIPV 99
BSNT_04976___ 101 LFQASNMSDMGSSVKELFHPLFIALFVDLVFLL-LFARKTKHPQTKAAPR 149
||||.||.|||||:.|||||||:.:.||.|.|. |..||...| ||:.:
BPUM_3001 100 LFQAKNMGDMGSSMTELFHPLFVLMLVDFVVLAWLLKRKPLAP--KASYK 147
BSNT_04976___ 150 TIKRYYAASCGMLLCTLALAEVQQPKLLAHSFDREMLVKSIGLFQFHIYD 199
|||.|||..|..||..::.|.:..|:.|..|:|||::|:::||||||:||
BPUM_3001 148 TIKTYYAICCSFLLFHISSAMMDHPRFLTSSYDREVIVRNLGLFQFHLYD 197
BSNT_04976___ 200 TISQTVNISAKAFADEDSITAIKNYTEADYSKPDQSKFGLAKGRNVIFVT 249
..:||..|..|||||||:::.:.|||:||||.|::..||||||:||:|::
BPUM_3001 198 GAAQTARIGQKAFADEDTLSTVANYTKADYSAPNEEYFGLAKGKNVVFIS 247
BSNT_04976___ 250 LESTQSFVLNEKVNGKEITPFMNDLIKKSYSFDHFYQQTEQGKTSDSEFI 299
|||||.||:|:||||:.||||:|.|.|||:.||.||||||||||||||||
BPUM_3001 248 LESTQQFVMNQKVNGQYITPFLNQLAKKSFYFDEFYQQTEQGKTSDSEFI 297
BSNT_04976___ 300 VANSLYPSLSGAVFFTKSDHQFYTMYKSLKQHDYYSAVFHANHKTFWNRD 349
||||||||.|||||||.||:::.|:||.||:.:|.|..||||:|||||||
BPUM_3001 298 VANSLYPSSSGAVFFTASDNKYDTLYKQLKKENYQSVQFHANNKTFWNRD 347
BSNT_04976___ 350 VMYDTFGIDRFFDVDDFHVTPGTSTSWGLKDKEFLEQSAEKLKSLPQPFY 399
|||::.|||||:|||.:||....||.|||||.:|.:||.:.||.|.||:|
BPUM_3001 348 VMYESLGIDRFYDVDSYHVNERNSTGWGLKDIDFFDQSIDYLKKLKQPYY 397
BSNT_04976___ 400 SSFITLTNHFPFEIDEKDQLIDEFDSSSDLLNRYVTTVRYEDEALKHFIK 449
|:|||||||||||||.:||.|||:||||.:||||||||||:|||:|.|..
BPUM_3001 398 STFITLTNHFPFEIDPQDQFIDEYDSSSTILNRYVTTVRYQDEAIKMFFD 447
BSNT_04976___ 450 KLKDEGLYENSMIVFMGDHYGISEAHNEAMAEFLRKDEITPYDNVQLQRV 499
::|:||||:|:|.|.|||||||||||:||||:.|.::||||:|.|:||||
BPUM_3001 448 RMKEEGLYDNTMFVLMGDHYGISEAHHEAMAQLLNQEEITPFDAVKLQRV 497
BSNT_04976___ 500 PFIIHIPGITDQQPETIPDAGGQVDVRPTLMHLLGVETKGDIQFGNDLLS 549
||:|:|||:|||.|:||.:..||:||:|||:||||:|||..|||||||.|
BPUM_3001 498 PFLIYIPGVTDQAPQTISETAGQMDVKPTLLHLLGIETKNSIQFGNDLFS 547
BSNT_04976___ 550 GDRTPFAVLRNGSFITNDYIYTKNTCYSQKTGEVLEDQDACLPYKEKANE 599
.:||||||||||:|||::|:|||||||.|||.|.::..:.|.||.||||:
BPUM_3001 548 DERTPFAVLRNGNFITDEYLYTKNTCYDQKTKEPVKQDEVCQPYIEKANK 597
BSNT_04976___ 600 ELSLSDKILNGDLLRFSE- 617
|||||||::||:||||.:
BPUM_3001 598 ELSLSDKVINGNLLRFYQQ 616
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