Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04967 and BPUM_2992
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:41
# Commandline: needle
# -asequence pep-align/BSNT_04967___fhuB.1.24716.seq
# -bsequence pep-align/BPUM_2992___fhuB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04967___fhuB-BPUM_2992___fhuB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04967___fhuB-BPUM_2992___fhuB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04967___fhuB
# 2: BPUM_2992___fhuB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity: 238/399 (59.6%)
# Similarity: 286/399 (71.7%)
# Gaps: 49/399 (12.3%)
# Score: 1250.0
#
#
#=======================================
BSNT_04967___ 1 MIIPLQVPVDTIFLQMHFHFCSKHSIKSAEKSDILKQQLIIIISNRKEVR 50
.
BPUM_2992___f 1 -------------------------------------------------M 1
BSNT_04967___ 51 QLSQHKNIQTASEEIQWTSRTYGAVIVLIAGLCLLCLGAFLSISLGAADI 100
....:|.:....:|:...::.:|...|:|.|...|..|.|||:|||||:|
BPUM_2992___f 2 GSQSNKQLPAKDDEMDIVTKPFGTAAVVIIGSIALAFGLFLSVSLGAANI 51
BSNT_04967___ 101 HLRTVWDAIFYFKPTKTSHQIIHDLRLPRTAAAALVGALLAVSGAIMQGM 150
||.|||:|||.|.|.:||||||.:|||||||.||||||.|||||||||||
BPUM_2992___f 52 HLHTVWEAIFQFDPQQTSHQIIRELRLPRTAGAALVGAFLAVSGAIMQGM 101
BSNT_04967___ 151 TRNPLAEPSIMGVTSGSAFAVSIAFAFFPGLSAMGLVLWSFAGAGLGAST 200
|||.||.|.|||||:|||||::||||||||.|:..|:|||||||.||||.
BPUM_2992___f 102 TRNALASPEIMGVTNGSAFAIAIAFAFFPGQSSFTLILWSFAGAALGASI 151
BSNT_04967___ 201 VMGIGLFSRGGLTPVKLALAGTAVTYFFTGISTAIAIRFDVAQDISFWYA 250
|.|:|..|:|||||||||||||||....:.||||||||||||||:|||||
BPUM_2992___f 152 VFGVGTLSKGGLTPVKLALAGTAVGALLSSISTAIAIRFDVAQDMSFWYA 201
BSNT_04967___ 251 GGVAGVKWPGVQLLFIAGAVGLTLAFFIARSVTVLSLGDDLAKGLGQYTS 300
|||||:.|..:|::......||.:|..:|||:|||||||:|||||||||.
BPUM_2992___f 202 GGVAGLNWSNIQVVIPVAIAGLVVAMILARSITVLSLGDELAKGLGQYTK 251
BSNT_04967___ 301 AVKLVGMLIVVILTGAAVSIAGTIAFIGLIIPHITRFLVGVDYRWIIPCS 350
.||::|:|:|::|||||||:||:|.||||:|||:||||||||||||||||
BPUM_2992___f 252 TVKVLGILVVILLTGAAVSVAGSIGFIGLVIPHVTRFLVGVDYRWIIPCS 301
BSNT_04967___ 351 AVLGAVLLVFADIAARLVNAPFETPVGALTSLIGVPFFFYLARRERRGL 399
|:|||:||::||||||||||||||||||:|::||||||.|||||||.|:
BPUM_2992___f 302 AILGAILLIYADIAARLVNAPFETPVGAITAIIGVPFFLYLARRERSGI 350
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