Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04965 and BPUM_2991

See DNA alignment / Visit BSNT_04965 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:41
# Commandline: needle
#    -asequence pep-align/BSNT_04965___fhuG.1.24716.seq
#    -bsequence pep-align/BPUM_2991___fhuG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04965___fhuG-BPUM_2991___fhuG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04965___fhuG-BPUM_2991___fhuG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04965___fhuG
# 2: BPUM_2991___fhuG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 340
# Identity:     211/340 (62.1%)
# Similarity:   261/340 (76.8%)
# Gaps:           4/340 ( 1.2%)
# Score: 1094.0
# 
#
#=======================================

BSNT_04965___      1 ----MKTKTNKPLIVMAVTFLLIVVVFFISLNLGVIKIAPLKTLQVFFGQ     46
                         .:.|..|....|.:.||.|||||.||||.|.|:|:|:.||:.|||.
BPUM_2991___f      1 MEMVQQAKIKKYKRTMLMIFLAIVVVFLISLNTGEIRISPIDTLKTFFGF     50

BSNT_04965___     47 GTARDELVLFEFRLPRIILSLLVGAGISVAGAILQSVSQNELAEPGILGI     96
                     |:..||||||||||||:|::|||||.|:|:|||.|.||||.||:|||||:
BPUM_2991___f     51 GSEMDELVLFEFRLPRMIIALLVGASIAVSGAIWQGVSQNGLADPGILGV    100

BSNT_04965___     97 NAGGSLAVVLFIYFFQGSASDLSFFGTFMLPFSALAGAILAAFLIYILAW    146
                     |||...||||||:.|||:.|:|.....|:||..|.|||..||||||:|||
BPUM_2991___f    101 NAGAGFAVVLFIFVFQGTMSNLGQLTIFILPLFAFAGAAFAAFLIYVLAW    150

BSNT_04965___    147 KKGVTPIRLILVGIGVNAGFNALLLIFQLKMDPHDFMQAAVWISGSIWGA    196
                     |||:||:||||.||||||.|:|.:::.||||.|:||.||.||:||||||:
BPUM_2991___f    151 KKGITPVRLILTGIGVNAAFSAAIVVIQLKMSPNDFNQAIVWLSGSIWGS    200

BSNT_04965___    197 NWNMIWAILPWIVILLLFTLYKARYLNIMQLGDQLATGLGTAVEKERRIL    246
                     :|..:.::|||::|.|:..|.:|||||||.|||||:.|||.:|.|||..:
BPUM_2991___f    201 SWTYVLSVLPWMLIFLVLALVRARYLNIMNLGDQLSYGLGISVHKERSFM    250

BSNT_04965___    247 LLAAVTLAASCVAAAGGIAFLGLIAPHVARRLTGPRHQTLIPVSAFIGSF    296
                     :|.||.||.:.||.||.|:||||.|||:||:|.||:||.:||.||.||:.
BPUM_2991___f    251 MLIAVALAGASVAVAGSISFLGLAAPHLARKLVGPKHQGMIPASALIGAL    300

BSNT_04965___    297 LFLLADTLARNVLAPSEIPVGLVISVLGAPYFIYLLMKAN    336
                     |.||||||.|.:|||||:|||||:|.||||||||||||.|
BPUM_2991___f    301 LLLLADTLGRVILAPSEVPVGLVVSALGAPYFIYLLMKTN    340


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