Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04965 and BPUM_2991
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:41
# Commandline: needle
# -asequence dna-align/BSNT_04965___fhuG.1.24716.seq
# -bsequence dna-align/BPUM_2991___fhuG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04965___fhuG-BPUM_2991___fhuG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04965___fhuG-BPUM_2991___fhuG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04965___fhuG
# 2: BPUM_2991___fhuG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1102
# Identity: 685/1102 (62.2%)
# Similarity: 685/1102 (62.2%)
# Gaps: 170/1102 (15.4%)
# Score: 1858.0
#
#
#=======================================
BSNT_04965___ 1 ATGAAAA------------CAAAAACAAACAAACCGCTTATTGTAATG-- 36
|||.||| ||||.|.|||.||| ||| .||.|
BPUM_2991___f 1 ATGGAAATGGTGCAGCAGGCAAAGATAAAGAAA-----TAT--AAACGAA 43
BSNT_04965___ 37 ----GCTG-TGACCTTTTT-GCTTATCGTGGTGGTCTTTTTTATCAGTCT 80
|||| |||.|||||| || .|||||.|||||.|||||.||.|||.|
BPUM_2991___f 44 CGATGCTGATGATCTTTTTAGC-CATCGTCGTGGTATTTTTGATTAGTTT 92
BSNT_04965___ 81 CAATTTGGGCGTTATCAAA-----ATTGCACCG---------CTTAAAAC 116
.|||...||.| ||| |||.|.||| .|.|||||
BPUM_2991___f 93 AAATACCGGGG-----AAATTCGTATTTCTCCGATAGATACATTGAAAAC 137
BSNT_04965___ 117 GCTTCAGGTCTTT---TTCGGCCAAG-GAACGGCGCGTGATGAACTTGTC 162
..|| ||| ||||| ||| |||..| |||||.||.||.
BPUM_2991___f 138 ATTT------TTTGGATTCGG--AAGCGAAATG-----GATGAGCTGGTG 174
BSNT_04965___ 163 TTATTTGAGTTCAGGCTGCCTCGGATCATCCTTTCTTTGCTTGTTGGAGC 212
.|.||.||.|||||.||.||..|.||.|||.|..||||.||||||||.||
BPUM_2991___f 175 CTGTTCGAATTCAGACTTCCAAGAATGATCATCGCTTTACTTGTTGGTGC 224
BSNT_04965___ 213 AGGGATCTCCGTAGCTGGAGCCATTTTGCAAAGCGTGTCTCAAAATGAAC 262
....|||.|.||..|.|||||.||||.||||.|.||.||||||||.| .|
BPUM_2991___f 225 TTCTATCGCTGTTTCAGGAGCTATTTGGCAAGGTGTTTCTCAAAACG-GC 273
BSNT_04965___ 263 TT-GCCGAGCCTGGTATTCTCGGAATTAACGCCGGCGGTTCA---CTTGC 308
|| ||.||.|||||.|||||.||..|.||.||.|||| || .||||
BPUM_2991___f 274 TTAGCTGATCCTGGAATTCTTGGTGTGAATGCGGGCG---CAGGCTTTGC 320
BSNT_04965___ 309 TGTAGTGCTTTTTATATACTTT---TTTCAAGG------GTCAGCTTCAG 349
|||.||||||||||| |||| |||||||| ||| |
BPUM_2991___f 321 TGTTGTGCTTTTTAT---CTTTGTATTTCAAGGCACGATGTC-------G 360
BSNT_04965___ 350 ATCTCAGCT---TTTTCGGAACATTTATGCTGCC---ATTCAGTGCTTTG 393
|.||.||.| ||..|| |..|||||.||||| .||| ||.||.
BPUM_2991___f 361 AACTTAGGTCAATTGACG--ATTTTTATCCTGCCGCTTTTC---GCATTT 405
BSNT_04965___ 394 GCAGGAGCAATCCTCGCTGCGTTTCTCATTTATATTCTGGCATGGAAAAA 443
|||||||||..|.|.|||||.||||||||.|||.|..|.||.||||||||
BPUM_2991___f 406 GCAGGAGCAGCCTTTGCTGCATTTCTCATCTATGTGTTAGCGTGGAAAAA 455
BSNT_04965___ 444 AGGCGTGACACCGATTCGGCTGATTTTAGTCGGCATAGGGGTGAATGC-- 491
||||.|.|||||..||||..|.||||||...||.||.||.||.||.||
BPUM_2991___f 456 AGGCATCACACCTGTTCGATTAATTTTAACGGGTATTGGCGTCAACGCTG 505
BSNT_04965___ 492 CGGATTCAATGC-CCTGTTGCTGATTTTTCAGCTTAAGATGGACCCTCAT 540
||..|||| || .|..||| ||.|..||||..|.||.|||..|||..||
BPUM_2991___f 506 CGTTTTCA--GCAGCAATTG-TGGTCATTCAATTAAAAATGAGCCCAAAT 552
BSNT_04965___ 541 GATTTTATGCAAGCCGCGGTTTGGATATCCGGCTCAATATGGGGGGCGAA 590
|||||||..||||||...||.|||.||||.||....||.|||||..|.|.
BPUM_2991___f 553 GATTTTAACCAAGCCATCGTGTGGCTATCAGGAAGTATTTGGGGCTCAAG 602
BSNT_04965___ 591 CTGGA-ATATG----ATCTGGGCGATTCTCCCTTGGATTGTGATCTTGCT 635
||||| .|||| |||.| ||||.||.|||||..|.||.||.||
BPUM_2991___f 603 CTGGACGTATGTCTTATCAG-----TTCTGCCATGGATGCTTATTTTCCT 647
BSNT_04965___ 636 TCTGTTTACTTTATATAAG-GCACGCTATTTGAACATTATGCAGCTCGGA 684
|.||||..|..| |.|.|| ||||||||.||.||.||.|||.|..|.||.
BPUM_2991___f 648 TGTGTTAGCGCT-TGTGAGAGCACGCTACTTAAATATCATGAATTTAGGT 696
BSNT_04965___ 685 GACCAATTGGC-GACC---GGGCTGGGCACCGCTGTTGAAAAGGAAAGAC 730
||||| || |.|| ||..|.||.|...|.|||.|.||.||||||.
BPUM_2991___f 697 GACCA----GCTGTCCTATGGATTAGGGATTTCAGTTCATAAAGAAAGAA 742
BSNT_04965___ 731 GGATTCTTCTTCTGGCAGCGGTCACTCTTGCCGCTTCATGCGTGGCAGCT 780
| ||||..|..|| |.| ||||||.|.||| |.||||.|
BPUM_2991___f 743 G-------CTTCATGATGC--TAA---TTGCCGTTGCAT---TAGCAGGT 777
BSNT_04965___ 781 GCGGGGGGC---ATTGC-----GTTTCTC-------GGATTGATCGCGCC 815
||..|.|.| .|||| ||.|||| ||.||...|||.||
BPUM_2991___f 778 GCAAGTGTCGCTGTTGCAGGTAGTATCTCTTTCTTAGGGTTAGCCGCACC 827
BSNT_04965___ 816 GCATGTGGCTAGAAGGCTGACCGGTCCACGTCACCA--GACGCTGATACC 863
|||..|.||.||||.|||....||.|||...||||| || .|||||||
BPUM_2991___f 828 GCACCTTGCGAGAAAGCTTGTTGGACCAAAGCACCAAGGA--ATGATACC 875
BSNT_04965___ 864 GGTCTCCGCCTTCATCGGCTCATTCCTGTTTTTGCTTGCTGATACGCT-- 911
.|.||||||.||.||.|||.||.|..|.||.||.||.||.|||||.||
BPUM_2991___f 876 AGCCTCCGCGTTGATTGGCGCACTGTTATTATTACTGGCAGATACACTTG 925
BSNT_04965___ 912 GGCGAGAAATGTATTGGCACCATCAGAAATTCCGGTCGGACTTGTCATTT 961
|.||.|..| ||.|.|||||||||||..|.||.||.||.||.|||.|||
BPUM_2991___f 926 GTCGCGTCA--TACTTGCACCATCAGAGGTGCCAGTTGGTCTAGTCGTTT 973
BSNT_04965___ 962 CCGTGC--TAGGTGCGCCTTACTTTATTTATTTATTGATGAAAGCGAATT 1009
| ||| |||||||.||||||||.|||||.||||||||||||.||||||
BPUM_2991___f 974 C--TGCTTTAGGTGCACCTTACTTCATTTACTTATTGATGAAAACGAATT 1021
BSNT_04965___ 1010 AG 1011
|.
BPUM_2991___f 1022 AA 1023
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