Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04947 and BPUM_2988

See DNA alignment / Visit BSNT_04947 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:40
# Commandline: needle
#    -asequence pep-align/BSNT_04947___yvrG.1.24716.seq
#    -bsequence pep-align/BPUM_2988.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04947___yvrG-BPUM_2988.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04947___yvrG-BPUM_2988.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04947___yvrG
# 2: BPUM_2988
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 588
# Identity:     289/588 (49.1%)
# Similarity:   401/588 (68.2%)
# Gaps:          12/588 ( 2.0%)
# Score: 1514.5
# 
#
#=======================================

BSNT_04947___      1 MRLRWKFLFHFFGQMLIVILLLTVMLVASFF----YLDARFSDAESNSGL     46
                     |.||.|..|||.|||.|||   .|.::.:.|    || .::.:..:.:||
BPUM_2988          1 MNLRAKLFFHFVGQMFIVI---AVFIIGNTFSDNLYL-KKYYENMAETGL     46

BSNT_04947___     47 TKATTDTLEAYLDVNEDGTWEVDNFLKKSVDKQHGWMQIIDSEGNTDYSY     96
                     |||..|||.::|..||||..|.|:.||::|.|:.||:|:|||:.:..|||
BPUM_2988         47 TKADGDTLMSWLYFNEDGEMEADDQLKQAVRKRDGWLQVIDSKKHNVYSY     96

BSNT_04947___     97 GVPKDVPGTYTKKELLSIYKTKKLHNYKLNYWAINIEDKSYLLLSGWKSK    146
                     ..||.:|.:|.|.|::.|::.::..:||:.:|.|.|:.||:::|.|:|:.
BPUM_2988         97 HRPKSIPTSYQKDEMIQIFEKRQFKDYKMYFWPIEIDQKSFIVLYGFKTN    146

BSNT_04947___    147 SEQLLTSVEKREQKIDSLAHYKSSTIDYIKRKKGAIYLLDSNGKILDSIN    196
                     |.::...:::.|:.:.:|:.|...|.:::||..|:::|.:..||.|..|.
BPUM_2988        147 STKVANYLKQNEKNLAALSQYSVETKEFLKRMNGSVHLFNDEGKYLKGIR    196

BSNT_04947___    197 STKSERKTMNQLELLKYSSKPWNYKREISVKILNKDRWMVATVPNPVYVT    246
                     :..:.:..:..:|||||.||||.::.::|...:||:.:|:.:|||.||..
BPUM_2988        197 ANTNLKHDVTDVELLKYQSKPWEFRSDLSYIRVNKNLYMIISVPNKVYSP    246

BSNT_04947___    247 DQEFNKSFLKVVLKAMFLVMAVLFMYIIWMTVWYMFRFGLPIFHTIRWLV    296
                     |..::|....:......|:..:....||.||:||.:|:||||:|.||||:
BPUM_2988        247 DGLYDKETDALNQYTTILIAGLAITIIIVMTLWYSYRYGLPIYHIIRWLI    296

BSNT_04947___    297 NLSKGKLEEPRNRDGRPVSKNKKGKIKQPYRFFGEIFESMDQLTETLRRD    346
                     .||:.||:||.||.|.|:||||||:||:.||.|.:|.::|||||.||:.:
BPUM_2988        297 FLSRNKLQEPTNRKGIPISKNKKGRIKREYRLFEDILKTMDQLTLTLKEN    346

BSNT_04947___    347 KRNREKIQATREEWIAGLSHDLKTPLSSIYGYSMMLESKQYDWSPEEVKE    396
                     :.||.|||.||||||||||||||||||:||||.:||||.||.||.|||.|
BPUM_2988        347 EENRRKIQTTREEWIAGLSHDLKTPLSTIYGYGLMLESDQYQWSKEEVME    396

BSNT_04947___    397 MGQVVREKSEYMSKLIEDLNLTYRLKNDALPIERNLTSLIPFFKNVIEDF    446
                     ||||:||||||||.|||||||||||||.||||.|....|..|..:::::|
BPUM_2988        397 MGQVIREKSEYMSTLIEDLNLTYRLKNGALPINRKPVELGEFLASIMDEF    446

BSNT_04947___    447 KKNPFSEGYDISFVSKEEHIEFALDEAWFRRILENLLGNAVKHNGKGTEI    496
                     .::.|||.:..||..:...:.|.:|:|||||::||||.||||||.|||.|
BPUM_2988        447 SRSSFSEDFSSSFEDQTNGVIFEIDKAWFRRVIENLLANAVKHNQKGTHI    496

BSNT_04947___    497 QVILEQTKNHISLKVKDNGKGMDEETITHLFNRYYRGTNTKDSTAGTGLG    546
                     ..:|.:|...|.:::||||.||.:||:.||||||||||||.|.|.|||||
BPUM_2988        497 TAVLSETNEEIRIEMKDNGCGMAQETVDHLFNRYYRGTNTNDPTNGTGLG    546

BSNT_04947___    547 LAIAKELVHLHNGTIHVNSRMNIGTVITILFKKQ----    580
                     ||||||||.||:|.|.|.|....||.|.|:.||.    
BPUM_2988        547 LAIAKELVLLHDGDIQVESEPGAGTTIAIILKKSPSVK    584


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04947 and BPUM_2988

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
