Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02098 and BPUM_2985
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:32
# Commandline: needle
# -asequence pep-align/BSNT_02098___uxaB.1.24716.seq
# -bsequence pep-align/BPUM_2985___uxaB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02098___uxaB-BPUM_2985___uxaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02098___uxaB-BPUM_2985___uxaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02098___uxaB
# 2: BPUM_2985___uxaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 488
# Identity: 247/488 (50.6%)
# Similarity: 337/488 (69.1%)
# Gaps: 11/488 ( 2.3%)
# Score: 1232.5
#
#
#=======================================
BSNT_02098___ 1 MQKLNKNVYDHYTRYPEKILQFGEGNFLRGFVDWQIDQLNQHTDFNGSVA 50
|::|:|::|. .:.|||.|||.|||||:|||::|.|.:||..|||.|...
BPUM_2985___u 1 MKRLSKSIYP-VSEYPETILQIGEGNFMRGFMNWHIQKLNDCTDFKGRAV 49
BSNT_02098___ 51 VVQPR-GSEKIKRLNQQDGLYTLFLQGMKDGEAVNEHMIINSISRGIDLF 99
||.|| || :..||:|||||||.:||..||:.:||.|||.||||||..:
BPUM_2985___u 50 VVPPRKGS--VAALNEQDGLYTLCIQGYHDGQEMNERMIIQSISRGISTY 97
BSNT_02098___ 100 SDYEAYKELASSERLRFIISNTTEAGIVCDEKDRLEDRPQKTFPGKLTAF 149
.||:.:.::|.:..|||:.|||||||::..::||||||||.:||||||||
BPUM_2985___u 98 MDYDVFLQVAENPDLRFVFSNTTEAGLMFRKEDRLEDRPQASFPGKLTAF 147
BSNT_02098___ 150 LYFRFQAFKGDQTKGCVLIPCELIENNGEKLKETVLHYAGLWKLEEGFTQ 199
||.||::|.||:.||.:::||||:|:||::|||.|:..|..|:|...|..
BPUM_2985___u 148 LYHRFKSFAGDEQKGMIILPCELVEHNGDRLKEYVVDMAIEWELPLAFIT 197
BSNT_02098___ 200 WIHEANTFCNSLVDRIVPGFPVDSIDEITADLGYQDDLIVVGEQYYLWVI 249
||.|||||||:|||||||||..:..:.:..:.||.|:|:|..|.|:|:||
BPUM_2985___u 198 WIKEANTFCNTLVDRIVPGFSKEVAEMVQKEEGYIDELLVTAEYYHLFVI 247
BSNT_02098___ 250 EGPDWIGKELPFAAAGLHTKIVSDLTPYRTKKVRILNGAHTAMTPVALLY 299
|.|.::.|||||..|||:...|.|:.|||..||||||||||||.|:|...
BPUM_2985___u 248 EAPVFVQKELPFQKAGLNVLFVEDIAPYRISKVRILNGAHTAMVPIAYSC 297
BSNT_02098___ 300 GLKTVRDAVEHPEVGRFIRELIDDEILPVLKM--EGLSQYADDVLNRFKN 347
|::||.:||...:||.|||.::::|:||.|:: :.|..|...|.:||.|
BPUM_2985___u 298 GIETVNEAVGDEDVGPFIRRMLEEEVLPGLELSRDELLLYTQSVWDRFCN 347
BSNT_02098___ 348 PYIKHYLESIALSSVSKFKTRNLPTLKEYAEQKGQLPERLVFSFSALLYF 397
|:::|.|..|||:.||||:||.||:|.:|.|||.|||.:||||.|:|:||
BPUM_2985___u 348 PFVQHQLLDIALNGVSKFRTRILPSLLDYVEQKKQLPMKLVFSLSSLIYF 397
BSNT_02098___ 398 YH-NNETLQDDPAVLQFFKEVWCQEDDDMLRIASRVLGEQRLWGADLNEI 446
|. :.|.::||..||.|.|:|:.:.:.....||::||..:.|||.:|.:|
BPUM_2985___u 398 YRAHAEKIKDDETVLAFMKDVFEEVNKSNEAIAAKVLSCESLWGRNLTDI 447
BSNT_02098___ 447 PKLTDRVAVYLNLIHELGM----QRALEQYCIQEGEVR 480
..|...||..|..|.|.|| ||.|:.....:||..
BPUM_2985___u 448 HDLVHAVADQLTFIQEEGMRAAVQRMLQHQYESQGEKA 485
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