Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04939 and BPUM_2980
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:40
# Commandline: needle
# -asequence pep-align/BSNT_04939___yvrB.1.24716.seq
# -bsequence pep-align/BPUM_2980.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04939___yvrB-BPUM_2980.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04939___yvrB-BPUM_2980.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04939___yvrB
# 2: BPUM_2980
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 352
# Identity: 235/352 (66.8%)
# Similarity: 277/352 (78.7%)
# Gaps: 25/352 ( 7.1%)
# Score: 1186.0
#
#
#=======================================
BSNT_04939___ 1 -------------------------MSVILGISCGSLHIPIPAVFRVFWH 25
:|:.:|||.|||.||||::.|:|.|
BPUM_2980 1 MRKASILTRSNKFIIAYTLSSLLLVVSIGMGISFGSLGIPIPSILRIFVH 50
BSNT_04939___ 26 QGFGGSIGSDDPMYTNIMMNIRLPRVVLAALVGAALSIAGAAFQGLLKNP 75
:.||..||:.|.:..|||||||||||:|||||||||:::|||||||||||
BPUM_2980 51 ELFGVQIGTIDSIDRNIMMNIRLPRVILAALVGAALALSGAAFQGLLKNP 100
BSNT_04939___ 76 LADPYTLGVSSGASVGAVVTLFLGLHLPVIGGFTLPVVSVAAALATMAAV 125
||||||||||.|||||||.|||..|.||::|.||||..|:..||.|:..|
BPUM_2980 101 LADPYTLGVSQGASVGAVATLFFSLQLPLLGSFTLPFFSMTTALVTLCLV 150
BSNT_04939___ 126 LFFSRLVHASMSVSTLILTGVITNSFLGAFISLIIALTGDNLLPIVHWLL 175
|||:||||..||:|:|||||||.:|||||.|||:||||||:|..|:||||
BPUM_2980 151 LFFARLVHRGMSISSLILTGVIFSSFLGALISLMIALTGDDLKEIIHWLL 200
BSNT_04939___ 176 GSVSMRGWSYVILFLPFFLLGTILLIINGRELNVMTYGEDKAKLLGVSVQ 225
||||||||.|::|||||||:||..|::.||:||||||||:|||||||.|:
BPUM_2980 201 GSVSMRGWRYIVLFLPFFLIGTFALLLMGRDLNVMTYGEEKAKLLGVHVK 250
BSNT_04939___ 226 QRKMLILIAGSLLTGSAVAVSGTIGFVGLVIPHITRLLWGTDHRHLLPLS 275
:.|.::|:|||:|||||||||||||||||||||..|||..||||||||||
BPUM_2980 251 RSKYIVLLAGSILTGSAVAVSGTIGFVGLVIPHFIRLLAITDHRHLLPLS 300
BSNT_04939___ 276 ALLGAGFLVLADLLSRTIIEPIELPIGIITSLAGAPVFALILIRQHRGGR 325
.|.||.||||||:||||||||.||||||||:|.|||||.:||||::|||.
BPUM_2980 301 MLNGASFLVLADVLSRTIIEPTELPIGIITALIGAPVFGIILIRKYRGGT 350
BSNT_04939___ 326 SL 327
.|
BPUM_2980 351 HL 352
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