Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04937 and BPUM_2969
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:40
# Commandline: needle
# -asequence pep-align/BSNT_04937___yvqK.1.24716.seq
# -bsequence pep-align/BPUM_2969.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04937___yvqK-BPUM_2969.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04937___yvqK-BPUM_2969.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04937___yvqK
# 2: BPUM_2969
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 195
# Identity: 127/195 (65.1%)
# Similarity: 149/195 (76.4%)
# Gaps: 8/195 ( 4.1%)
# Score: 626.5
#
#
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BSNT_04937___ 1 MKLYTKTGDKGQTGLVGGRTDKDSLRVESYGTIDELNSFIGLALAEL--S 48
|||||||||:|||||:|||||||.:|||:|||:||.|||||||.|:| .
BPUM_2969 1 MKLYTKTGDQGQTGLIGGRTDKDDVRVEAYGTLDEANSFIGLAHAKLRQH 50
BSNT_04937___ 49 GQLGFEDLTAELLTIQHELFDCGGDLAIVTERKDYKLTEESVSFLETRID 98
|:| |:|:.:||:.|||||||||||||.|...|:.||||.||:.||.|:|
BPUM_2969 51 GEL-FQDILSELIVIQHELFDCGGDLAAVKLPKEGKLTEASVAVLEQRMD 99
BSNT_04937___ 99 AYTAEAPELKKFILPGGSKGASLLHIARTITRRAERRVVALMKSEEIHET 148
.|..||..|.|||||||.:||:|||:|||:.|||||::|.|.|.|||...
BPUM_2969 100 VYVEEAEPLTKFILPGGQEGAALLHVARTVVRRAERQMVTLAKEEEIPPV 149
BSNT_04937___ 149 VLRYLNRLSDYFFAAARVVNARSGIGDVEYERSAIVFRDRNSSES 193
.|.|:||||||.|||||:||.|.|..||||||||.|||..
BPUM_2969 150 ALTYVNRLSDYLFAAARIVNHRLGEADVEYERSANVFRSN----- 189
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