Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04929 and BPUM_2966

See DNA alignment / Visit BSNT_04929 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:39
# Commandline: needle
#    -asequence pep-align/BSNT_04929.1.24716.seq
#    -bsequence pep-align/BPUM_2966.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04929-BPUM_2966.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04929-BPUM_2966.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04929
# 2: BPUM_2966
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:      91/290 (31.4%)
# Similarity:   146/290 (50.3%)
# Gaps:           1/290 ( 0.3%)
# Score: 400.0
# 
#
#=======================================

BSNT_04929         1 MKKMLGKLLITAGILVCFAVVVKDVFAAGLGFINGIEADSASASPRDIDS     50
                     ||:::|.:.|..|:.:...::.|:.....|.|.......:|||...:||.
BPUM_2966          1 MKRLIGLICILVGVFLMIGMLFKNENLFHLSFSREKPVTTASAKKDEIDQ     50

BSNT_04929        51 MVIESDSKDVRIIAEERSDISAGISGDSGKLFVTENKRKLELTVKEKEFQ    100
                     :.|......|::..|.|||||..:.|..||::..:......:..:.|.|.
BPUM_2966         51 LDISLSGFRVKVQPENRSDISVMVVGGKGKMYAEQTGSTFNVRAENKGFL    100

BSNT_04929       101 FLNGFNRSTLIVRLPYDYKGDLAVRTSSGDLSVAGNDHLALSGLNAVSAS    150
                     |...|.:..|:|::|.||..::.:...||...:.|...|:|..:...|.|
BPUM_2966        101 FFTSFEKGELLVKIPTDYHKNVKITGGSGVSEIDGEGKLSLEDVILKSTS    150

BSNT_04929       151 GNTSVTDVRLQDLKVKASSGDVSISNTVSKTAGIDLASGDANLVHVSGSL    200
                     ||.:..:....::::||:||.:|.|:..:|.:.|...||..::..|.|.:
BPUM_2966        151 GNLNAENFSANNVEIKATSGRLSASHIDAKNSDIGATSGRVDIKDVKGEM    200

BSNT_04929       201 DVKMTSGDFNAVLKKVTGPVSVTLTSGDANVSLPQNGCFAVNALSASGYV    250
                     .::||||...|....:..|||..:|||.|..:||..|.|.|.....||.|
BPUM_2966        201 QLEMTSGRLTASFDTIESPVSFHMTSGSAKFNLPDEGDFNVQVKKTSGSV    250

BSNT_04929       251 SSPYSFADKAHKEQHHITGTQGSGRHPIDIKTDSGDLAIR    290
                     ...|.| |:|..|....|||:|.|.|.:||:..||:|.:|
BPUM_2966        251 DHTYHF-DQADSEGRGFTGTRGKGTHLVDIEMTSGNLKLR    289


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