Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04926 and BPUM_2964

See DNA alignment / Visit BSNT_04926 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:39
# Commandline: needle
#    -asequence pep-align/BSNT_04926___yvqE.1.24716.seq
#    -bsequence pep-align/BPUM_2964.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04926___yvqE-BPUM_2964.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04926___yvqE-BPUM_2964.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04926___yvqE
# 2: BPUM_2964
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 361
# Identity:     250/361 (69.3%)
# Similarity:   305/361 (84.5%)
# Gaps:           8/361 ( 2.2%)
# Score: 1276.0
# 
#
#=======================================

BSNT_04926___      1 MRKKMLASLQWRAIRMTTGISLLLFACLISFMMFYYRLDPLVLLSSSWFG     50
                     |||..| .:||::||:..||||.:....:..|.|||:|||::|||:.|||
BPUM_2964          1 MRKLHL-GIQWQSIRLGVGISLGVVIMTMLPMFFYYQLDPMILLSTRWFG     49

BSNT_04926___     51 IPFILILLLISVTVGFASGYMYGNRLKTRIDTLIESILTFENGNFAYRIP    100
                     |||..|||:||:.:||::.:::|.:.|.|:|.|:||||.|||||||||:|
BPUM_2964         50 IPFFCILLIISLAIGFSASHVFGYQHKKRLDQLVESILKFENGNFAYRLP     99

BSNT_04926___    101 PLGDDEIGLAADQLNEMAKRVELQVASLQKLSNERAEWQAQMKKSVISEE    150
                     .|||||||||||||||||||||.||||||||||||||||.||||||:|||
BPUM_2964        100 SLGDDEIGLAADQLNEMAKRVEGQVASLQKLSNERAEWQVQMKKSVVSEE    149

BSNT_04926___    151 RQRLARDLHDAVSQQLFAISMMTSAVLEHVKDADDKTVKRIRMVEHMAGE    200
                     ||||||:||||||||||||||||||:||.:|:.|:|.:|::|:||.|||:
BPUM_2964        150 RQRLARELHDAVSQQLFAISMMTSAILEGMKEKDEKILKQMRLVERMAGD    199

BSNT_04926___    201 AQNEMRALLLHLRPVTLEGKGLKEGLTELLDEFRKKQPIDIEWDIQ-DTA    249
                     ||||||||||||||:|||||.||:||.|||:||:.||||||:|:|: |..
BPUM_2964        200 AQNEMRALLLHLRPITLEGKDLKKGLIELLNEFQAKQPIDIDWEIEDDVP    249

BSNT_04926___    250 ISKGVEDHLFRIVQEALSNVFRHSKASKVTVILGIKNSQLRLKVIDNGKG    299
                     :||||||||||||||||||||||:||:||||.|.|:|.|::||:||||.|
BPUM_2964        250 LSKGVEDHLFRIVQEALSNVFRHAKATKVTVRLLIRNRQVQLKIIDNGIG    299

BSNT_04926___    300 FKMDQVKASSYGLNSMKERASEIGGVAEVISVEGKGTQIEVKVPIFPEEK    349
                     |:.|.||.:||||.|::||.||:|||||::|.|||||||:||||||.|.|
BPUM_2964        300 FQTDHVKTASYGLESIRERTSEVGGVAEIMSFEGKGTQIDVKVPIFDEGK    349

BSNT_04926___    350 GENERDSSIID    360
                     |||.|      
BPUM_2964        350 GENVR------    354


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