Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04922 and BPUM_2960
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:39
# Commandline: needle
# -asequence pep-align/BSNT_04922___gerAB.1.24716.seq
# -bsequence pep-align/BPUM_2960___gerAB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04922___gerAB-BPUM_2960___gerAB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04922___gerAB-BPUM_2960___gerAB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04922___gerAB
# 2: BPUM_2960___gerAB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 368
# Identity: 185/368 (50.3%)
# Similarity: 269/368 (73.1%)
# Gaps: 7/368 ( 1.9%)
# Score: 1004.0
#
#
#=======================================
BSNT_04922___ 1 -MSQKQTPLKLNTFQGISIVANTMLGAGLLTLPRALTTKANTPDGWITLI 49
::.|:: ::::|..:|:|||.|||.::.|||::...|.||||||.|:
BPUM_2960___g 1 MVNHKES---ISSYQASAIIANTTLGASMMILPRSMAQAAATPDGWIALL 47
BSNT_04922___ 50 LEGFIFIFFIYLNTLIQKKHQYPSLFEYLKEGLGKWIGSIIGLLICGYFL 99
|...|:|.||:.|.|:.||..:.|.::|..||||||||::..|||..|||
BPUM_2960___g 48 LMSVIYIVFIFANVLMMKKVPFSSYYDYTNEGLGKWIGALANLLIIIYFL 97
BSNT_04922___ 100 GVASFETRAMAEMVKFFLLERTPIQVIILTFICCGIYLIVGGLSDVSRLF 149
||||:|.|||:||||||||:.||:.|.:::||..|.||::||:.|::|||
BPUM_2960___g 98 GVASYEVRAMSEMVKFFLLQNTPVAVTMISFIVVGFYLVIGGIGDLARLF 147
BSNT_04922___ 150 PFYLTVTIIILLIVFGISFKIFDINNLRPVLGEGLGPIANSLTVVSISFL 199
||.|.||:|||.:.:|:|.:.|.::|||||||||..|:.||....:|||:
BPUM_2960___g 148 PFILIVTLIILFVAYGLSLQEFKLDNLRPVLGEGFSPVFNSFNASAISFV 197
BSNT_04922___ 200 GMEVMLFLPEHMKKKKYTFRYASLGFLIPIILYILTYIIVVGALTAPEVK 249
|:|:|||:|.:|..:|:||.|.::|||||.|:||.|||:||||||..|..
BPUM_2960___g 198 GIEMMLFMPAYMNTQKHTFAYGTVGFLIPAIIYIFTYILVVGALTVKETA 247
BSNT_04922___ 250 TLIWPTISLFQSFELKGIFIERFESFLLVVWIIQFFTTFVIYGYFAANGL 299
||.||||:|||:|:::|:||||.:||||:||::|.:|:||.|.:|||.|:
BPUM_2960___g 248 TLTWPTIALFQAFDIQGVFIERIDSFLLIVWLVQLYTSFVGYTFFAAIGV 297
BSNT_04922___ 300 KKTFGLSTKTSMVIIGIAVFYFSLWPDDANQVMMYSDYLGYIFVSLF-LL 348
.|......|..:.::||.:::.:::|.|.:.|..|..|:..:|..|| :|
BPUM_2960___g 298 SKLTKFPKKVVLALMGIVIYFAAIFPKDVDTVRDYLTYVNNLFFLLFGIL 347
BSNT_04922___ 349 PFILFFIVALK-RRITAK 365
||:|||||.:| ||.||
BPUM_2960___g 348 PFLLFFIVYIKRRRKTA- 364
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