Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04921 and BPUM_2959
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:39
# Commandline: needle
# -asequence pep-align/BSNT_04921___gerAA.1.24716.seq
# -bsequence pep-align/BPUM_2959___gerAA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04921___gerAA-BPUM_2959___gerAA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04921___gerAA-BPUM_2959___gerAA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04921___gerAA
# 2: BPUM_2959___gerAA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 482
# Identity: 307/482 (63.7%)
# Similarity: 377/482 (78.2%)
# Gaps: 8/482 ( 1.7%)
# Score: 1571.0
#
#
#=======================================
BSNT_04921___ 1 MEQTEFKEYIHDNLALVLPKLKENDDLVKNKKMLANGLVFYYLYFSELTD 50
|.||..||:::|||:::||:|||.||||..||.|.:|.|.||||..|:..
BPUM_2959___g 1 MNQTPLKEHLYDNLSVILPQLKEMDDLVHEKKTLPHGQVVYYLYIKEMNK 50
BSNT_04921___ 51 ENKVSEAIKTLIKDEETLTLDQVKKRLDQLDARPVETAKKTIESILNGNC 100
:.::...:|.|::|..:||.::::..|..:..|.|:|:::.:::|..|:|
BPUM_2959___g 51 KMEIQTFLKLLLQDHTSLTKEKLESNLSMMTTRSVKTSEELVDAIFEGHC 100
BSNT_04921___ 101 AVFINGLDKAYILTTGKKKTRSLTEPTTEIVVRGPKVAFVEDIDTNLALI 150
.|.|||...||||.|...|.|||.:.|:|.||||||:.|:||::|||||:
BPUM_2959___g 101 VVLINGFKHAYILETNGTKKRSLGDATSETVVRGPKIGFIEDLNTNLALV 150
BSNT_04921___ 151 RQRTSHPKLITKKIMIGENKLKPAAIMYIEGKAKKSVIKEVKARLKNIQL 200
|||..:|.:.|..:.||..|.....||||:|..:..|:||||.|||.:.:
BPUM_2959___g 151 RQRLKNPDVKTVDMKIGLQKYTQVTIMYIDGIVQVPVLKEVKKRLKQVTI 200
BSNT_04921___ 201 EDIQDSGTLEELIEDNKYSPFPQIQNTERPDKVSSALFNGRVAILVDGSP 250
:||||||.||||||||.||||||||||||||||:|||.||||||.||.||
BPUM_2959___g 201 DDIQDSGVLEELIEDNVYSPFPQIQNTERPDKVASALNNGRVAIFVDHSP 250
BSNT_04921___ 251 FVLLVPVSLGILMQSPDDYYERWISASLIRSLRYASIFITLFLSSIYIAL 300
|||:||.||..:||||||||||||:|||||.||:.|||:|||||:|||||
BPUM_2959___g 251 FVLVVPASLATIMQSPDDYYERWIAASLIRMLRFTSIFLTLFLSAIYIAL 300
BSNT_04921___ 301 VSFHQGLLPTALAVTISANRENVPFPPIFEALLMEVTIELLREAGLRLPN 350
||||||||||.||:|||:.||||||.||.|||:||:||||||||||||||
BPUM_2959___g 301 VSFHQGLLPTTLAITISSTRENVPFSPIVEALIMEITIELLREAGLRLPN 350
BSNT_04921___ 351 PLGQTIGLVGGVVIGQAAVEANLVSSIMVIVVSVIALASFTVPQYGMGLS 400
|||||||||||||||||||:|::|||||||:|||||||||||||||||:|
BPUM_2959___g 351 PLGQTIGLVGGVVIGQAAVQAHIVSSIMVIIVSVIALASFTVPQYGMGMS 400
BSNT_04921___ 401 FRVLRFISMFSAAILGLYGIILFMLVVYTHLTRQTSFGSPYFSPNGFFSL 450
||||||:|||:||..|||||.|||||:.||||||.|||:|||||:..||.
BPUM_2959___g 401 FRVLRFVSMFAAATFGLYGIALFMLVLLTHLTRQKSFGTPYFSPDFVFSY 450
BSNT_04921___ 451 KNTDDSIIRLPIKNKPKEANNPNEPKTDSTET 482
||.|:||||||:||:.|...:...
BPUM_2959___g 451 KNEDNSIIRLPLKNQQKGERDGQS-------- 474
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